Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL078601.1-201ENST00000444542 271 ntBASIC0.91□□□□□ -2.26
UBA52P62987 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.91□□□□□ -2.26
UBA52P62987 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.91□□□□□ -2.26
UBA52P62987 AC092902.1-201ENST00000486999 259 ntBASIC0.91□□□□□ -2.26
UBA52P62987 RPS23P4-201ENST00000487908 423 ntBASIC0.91□□□□□ -2.26
UBA52P62987 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
UBA52P62987 RNU6-113P-201ENST00000516653 101 ntBASIC0.91□□□□□ -2.26
UBA52P62987 AC025857.1-201ENST00000525252 377 ntBASIC0.91□□□□□ -2.26
UBA52P62987 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.91□□□□□ -2.26
UBA52P62987 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.91□□□□□ -2.26
UBA52P62987 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.91□□□□□ -2.26
UBA52P62987 AC040168.1-201ENST00000623594 991 ntBASIC0.91□□□□□ -2.26
UBA52P62987 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
UBA52P62987 SNORA18.2-201ENST00000383865 132 ntBASIC0.9□□□□□ -2.27
UBA52P62987 RNU6-1032P-201ENST00000384100 107 ntBASIC0.9□□□□□ -2.27
UBA52P62987 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.9□□□□□ -2.27
UBA52P62987 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.9□□□□□ -2.27
UBA52P62987 DDX3P2-201ENST00000446138 111 ntBASIC0.9□□□□□ -2.27
UBA52P62987 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.9□□□□□ -2.27
UBA52P62987 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.9□□□□□ -2.27
UBA52P62987 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.9□□□□□ -2.27
UBA52P62987 AC113398.2-201ENST00000507630 558 ntBASIC0.9□□□□□ -2.27
UBA52P62987 AC098591.2-201ENST00000510152 315 ntBASIC0.9□□□□□ -2.27
UBA52P62987 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.9□□□□□ -2.27
UBA52P62987 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.9□□□□□ -2.27
UBA52P62987 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.9□□□□□ -2.27
UBA52P62987 AL589743.7-201ENST00000612637 233 ntBASIC0.9□□□□□ -2.27
UBA52P62987 AC092140.2-201ENST00000618027 521 ntBASIC0.9□□□□□ -2.27
UBA52P62987 PVT1_3.1-201ENST00000620853 95 ntBASIC0.9□□□□□ -2.27
UBA52P62987 AC008443.7-201ENST00000622195 246 ntBASIC0.9□□□□□ -2.27
UBA52P62987 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.9□□□□□ -2.27
UBA52P62987 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
UBA52P62987 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
UBA52P62987 SNORD114-26-201ENST00000363543 72 ntBASIC0.89□□□□□ -2.27
UBA52P62987 MIR1303-201ENST00000408625 86 ntBASIC0.89□□□□□ -2.27
UBA52P62987 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.89□□□□□ -2.27
UBA52P62987 MTND4LP10-201ENST00000435146 291 ntBASIC0.89□□□□□ -2.27
UBA52P62987 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.89□□□□□ -2.27
UBA52P62987 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.89□□□□□ -2.27
UBA52P62987 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.89□□□□□ -2.27
UBA52P62987 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.89□□□□□ -2.27
UBA52P62987 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.89□□□□□ -2.27
UBA52P62987 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.89□□□□□ -2.27
UBA52P62987 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.89□□□□□ -2.27
UBA52P62987 SNORA31.6-201ENST00000516241 130 ntBASIC0.89□□□□□ -2.27
UBA52P62987 RN7SKP265-201ENST00000516448 223 ntBASIC0.89□□□□□ -2.27
UBA52P62987 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.89□□□□□ -2.27
UBA52P62987 AC135803.1-201ENST00000608748 565 ntBASIC0.89□□□□□ -2.27
UBA52P62987 AC008498.1-201ENST00000613012 531 ntBASIC0.89□□□□□ -2.27
UBA52P62987 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBA52P62987 AL049641.1-201ENST00000441055 1948 ntBASIC0.88□□□□□ -2.27
UBA52P62987 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBA52P62987 Y_RNA.67-201ENST00000362870 100 ntBASIC0.88□□□□□ -2.27
UBA52P62987 MIR598-201ENST00000384868 97 ntBASIC0.88□□□□□ -2.27
UBA52P62987 RNA5SP465-201ENST00000391195 109 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.88□□□□□ -2.27
UBA52P62987 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.88□□□□□ -2.27
UBA52P62987 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.88□□□□□ -2.27
UBA52P62987 AL590233.1-201ENST00000430017 456 ntBASIC0.88□□□□□ -2.27
UBA52P62987 RPL7P29-201ENST00000437151 728 ntBASIC0.88□□□□□ -2.27
UBA52P62987 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.88□□□□□ -2.27
UBA52P62987 MTND4LP16-201ENST00000440828 295 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.88□□□□□ -2.27
UBA52P62987 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.88□□□□□ -2.27
UBA52P62987 RPL39P29-201ENST00000447779 157 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AC017099.1-201ENST00000448261 1028 ntBASIC0.88□□□□□ -2.27
UBA52P62987 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.88□□□□□ -2.27
UBA52P62987 SNRPFP3-201ENST00000457792 225 ntBASIC0.88□□□□□ -2.27
UBA52P62987 PABPC1P3-201ENST00000469174 459 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.88□□□□□ -2.27
UBA52P62987 RPS27P23-201ENST00000487608 251 ntBASIC0.88□□□□□ -2.27
UBA52P62987 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.88□□□□□ -2.27
UBA52P62987 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.88□□□□□ -2.27
UBA52P62987 AC034114.1-201ENST00000520293 285 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AC025918.2-201ENST00000558683 763 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AC023825.1-201ENST00000566704 1030 ntBASIC0.88□□□□□ -2.27
UBA52P62987 MTATP6P3-201ENST00000581686 676 ntBASIC0.88□□□□□ -2.27
UBA52P62987 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.88□□□□□ -2.27
UBA52P62987 AC016727.2-201ENST00000603988 621 ntBASIC0.88□□□□□ -2.27
UBA52P62987 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.88□□□□□ -2.27
UBA52P62987 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBA52P62987 AC005832.2-201ENST00000538921 1430 ntBASIC0.88□□□□□ -2.27
UBA52P62987 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBA52P62987 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
UBA52P62987 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
UBA52P62987 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
UBA52P62987 MIR325-201ENST00000385260 98 ntBASIC0.87□□□□□ -2.27
UBA52P62987 RNU2-49P-201ENST00000410666 184 ntBASIC0.87□□□□□ -2.27
UBA52P62987 PIGPP2-201ENST00000411569 458 ntBASIC0.87□□□□□ -2.27
UBA52P62987 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.87□□□□□ -2.27
UBA52P62987 RPS15AP5-201ENST00000436276 388 ntBASIC0.87□□□□□ -2.27
UBA52P62987 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.87□□□□□ -2.27
UBA52P62987 AL022238.1-201ENST00000442557 355 ntBASIC0.87□□□□□ -2.27
UBA52P62987 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.87□□□□□ -2.27
UBA52P62987 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.87□□□□□ -2.27
UBA52P62987 MRPS17P3-201ENST00000465453 385 ntBASIC0.87□□□□□ -2.27
UBA52P62987 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.87□□□□□ -2.27
UBA52P62987 ARL2BPP4-201ENST00000506854 471 ntBASIC0.87□□□□□ -2.27
UBA52P62987 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms