Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MIR4452-201ENST00000583004 71 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AC005498.1-201ENST00000592125 465 ntBASIC0.02□□□□□ -2.41
RPL39P62891 MIR6504-201ENST00000613520 61 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AC009509.4-201ENST00000619202 509 ntBASIC0.02□□□□□ -2.41
RPL39P62891 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
RPL39P62891 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.02□□□□□ -2.41
RPL39P62891 AC110792.3-201ENST00000595906 1614 ntBASIC0.02□□□□□ -2.41
RPL39P62891 RNU1-133P-201ENST00000364867 167 ntBASIC0.01□□□□□ -2.41
RPL39P62891 RNA5SP299-201ENST00000391203 116 ntBASIC0.01□□□□□ -2.41
RPL39P62891 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.01□□□□□ -2.41
RPL39P62891 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.01□□□□□ -2.41
RPL39P62891 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.01□□□□□ -2.41
RPL39P62891 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.01□□□□□ -2.41
RPL39P62891 AL163195.1-201ENST00000496941 348 ntBASIC0.01□□□□□ -2.41
RPL39P62891 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.01□□□□□ -2.41
RPL39P62891 AC012414.6-201ENST00000568241 401 ntBASIC0.01□□□□□ -2.41
RPL39P62891 FAM106CP-201ENST00000582212 507 ntBASIC0.01□□□□□ -2.41
RPL39P62891 MIR3609-201ENST00000582661 80 ntBASIC0.01□□□□□ -2.41
RPL39P62891 RPL30P11-203ENST00000598995 310 ntBASIC0.01□□□□□ -2.41
RPL39P62891 AC006270.3-201ENST00000605967 1036 ntBASIC0.01□□□□□ -2.41
RPL39P62891 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.01□□□□□ -2.41
RPL39P62891 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.01□□□□□ -2.41
RPL39P62891 U4atac.1-201ENST00000618345 95 ntBASIC0.01□□□□□ -2.41
RPL39P62891 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.01□□□□□ -2.41
RPL39P62891 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.01□□□□□ -2.41
RPL39P62891 RNU6-349P-201ENST00000362402 107 ntBASIC0□□□□□ -2.41
RPL39P62891 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
RPL39P62891 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0□□□□□ -2.41
RPL39P62891 RPS26P5-201ENST00000418544 335 ntBASIC0□□□□□ -2.41
RPL39P62891 AL135790.2-201ENST00000437701 267 ntBASIC0□□□□□ -2.41
RPL39P62891 PGBD4P5-201ENST00000445958 426 ntBASIC0□□□□□ -2.41
RPL39P62891 RPS20P10-201ENST00000451209 253 ntBASIC0□□□□□ -2.41
RPL39P62891 TRBVA-201ENST00000498804 316 ntBASIC0□□□□□ -2.41
RPL39P62891 AC105313.1-201ENST00000509121 353 ntBASIC0□□□□□ -2.41
RPL39P62891 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0□□□□□ -2.41
RPL39P62891 SCARNA11.3-201ENST00000517276 130 ntBASIC0□□□□□ -2.41
RPL39P62891 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0□□□□□ -2.41
RPL39P62891 AC087897.1-201ENST00000550134 156 ntBASIC0□□□□□ -2.41
RPL39P62891 AL359212.1-201ENST00000556608 614 ntBASIC0□□□□□ -2.41
RPL39P62891 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0□□□□□ -2.41
RPL39P62891 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0□□□□□ -2.41
RPL39P62891 AC004852.3-201ENST00000614131 326 ntBASIC0□□□□□ -2.41
RPL39P62891 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
RPL39P62891 AL138726.1-201ENST00000614873 333 ntBASIC0□□□□□ -2.41
RPL39P62891 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0□□□□□ -2.41
RPL39P62891 AC005858.4-201ENST00000623191 700 ntBASIC0□□□□□ -2.41
RPL39P62891 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
RPL39P62891 GDI2P1-201ENST00000429312 1336 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 RNU6-1155P-201ENST00000363554 107 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 RNU6-748P-201ENST00000384648 107 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.01□□□□□ -2.41
RPL39P62891 AL645638.1-201ENST00000440519 361 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 ZNF736P11Y-201ENST00000442535 1213 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPL39P62891 AP003355.1-201ENST00000518956 587 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 AC068276.1-201ENST00000605793 379 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 AL355816.1-201ENST00000607951 118 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 AC017083.3-201ENST00000609955 700 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 AL138478.1-201ENST00000612252 832 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPL39P62891 MIR924-201ENST00000638017 53 ntBASIC-0.01□□□□□ -2.41
RPL39P62891 ZNF37BP-203ENST00000452306 1352 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 RNU6ATAC20P-201ENST00000408436 127 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 RNU2-70P-201ENST00000410718 179 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPL39P62891 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.02□□□□□ -2.41
RPL39P62891 FGF7P5-201ENST00000441829 291 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 RPS20P22-201ENST00000473700 357 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 HMGB1P35-201ENST00000503360 598 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPL39P62891 MIR892C-201ENST00000516410 77 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 RN7SKP277-201ENST00000516895 283 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 AP001893.2-201ENST00000526949 202 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC-0.02□□□□□ -2.41
RPL39P62891 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPL39P62891 MIR4781-201ENST00000585250 76 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC-0.02□□□□□ -2.41
RPL39P62891 MIR8065-201ENST00000620577 100 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 AC025048.6-202ENST00000627667 438 ntBASIC-0.02□□□□□ -2.41
RPL39P62891 FARSBP1-201ENST00000435808 1778 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
RPL39P62891 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
RPL39P62891 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
RPL39P62891 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 RNA5SP511-201ENST00000410487 115 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 AC017099.1-201ENST00000448261 1028 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 RPL26P9-201ENST00000457466 433 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC-0.03□□□□□ -2.41
RPL39P62891 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC-0.03□□□□□ -2.41
RPL39P62891 AC018659.1-201ENST00000551083 169 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 AC008088.1-201ENST00000580993 280 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC-0.03□□□□□ -2.41
RPL39P62891 AC069304.2-201ENST00000605154 435 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 AC009974.1-201ENST00000608881 455 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 MIR8070-201ENST00000616510 88 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms