Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNA5SP327-201ENST00000362494 101 ntBASIC0.82□□□□□ -2.28
RPS28P62857 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
RPS28P62857 RNU6-26P-201ENST00000383985 107 ntBASIC0.82□□□□□ -2.28
RPS28P62857 MIR506-201ENST00000384998 124 ntBASIC0.82□□□□□ -2.28
RPS28P62857 DHFRP6-201ENST00000401776 268 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AL021407.1-201ENST00000404531 386 ntBASIC0.82□□□□□ -2.28
RPS28P62857 RNU2-48P-201ENST00000410694 191 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.82□□□□□ -2.28
RPS28P62857 TAF13P2-201ENST00000416876 286 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.82□□□□□ -2.28
RPS28P62857 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.82□□□□□ -2.28
RPS28P62857 AC092634.2-201ENST00000428146 1010 ntBASIC0.82□□□□□ -2.28
RPS28P62857 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RPS28P62857 RPL23AP35-201ENST00000451906 501 ntBASIC0.82□□□□□ -2.28
RPS28P62857 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.82□□□□□ -2.28
RPS28P62857 NDUFA5P12-201ENST00000503796 343 ntBASIC0.82□□□□□ -2.28
RPS28P62857 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC0.82□□□□□ -2.28
RPS28P62857 RNU6-1183P-201ENST00000517054 60 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC019176.1-201ENST00000518519 225 ntBASIC0.82□□□□□ -2.28
RPS28P62857 COPS8P3-201ENST00000526024 482 ntBASIC0.82□□□□□ -2.28
RPS28P62857 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPS28P62857 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC0.82□□□□□ -2.28
RPS28P62857 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
RPS28P62857 MEG8-218ENST00000556720 456 ntTSL 3 BASIC0.82□□□□□ -2.28
RPS28P62857 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.82□□□□□ -2.28
RPS28P62857 MIR3937-201ENST00000580135 106 ntBASIC0.82□□□□□ -2.28
RPS28P62857 MIR4295-201ENST00000585286 85 ntBASIC0.82□□□□□ -2.28
RPS28P62857 CLIC4P2-201ENST00000601934 717 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC073410.2-201ENST00000603240 332 ntBASIC0.82□□□□□ -2.28
RPS28P62857 HSPE1P19-201ENST00000603327 295 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC098826.3-201ENST00000603823 466 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC107952.2-201ENST00000606048 486 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC103810.9-201ENST00000606688 112 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC096772.1-201ENST00000609146 564 ntBASIC0.82□□□□□ -2.28
RPS28P62857 AC093673.2-201ENST00000609674 331 ntBASIC0.82□□□□□ -2.28
RPS28P62857 TUG1_2.1-201ENST00000614234 87 ntBASIC0.82□□□□□ -2.28
RPS28P62857 MIR1322-201ENST00000638013 71 ntBASIC0.82□□□□□ -2.28
RPS28P62857 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPS28P62857 AC006020.1-201ENST00000420179 1854 ntBASIC0.82□□□□□ -2.28
RPS28P62857 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RPS28P62857 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RPS28P62857 SNORA51.1-201ENST00000363243 140 ntBASIC0.81□□□□□ -2.28
RPS28P62857 RNU6-23P-201ENST00000363283 107 ntBASIC0.81□□□□□ -2.28
RPS28P62857 SNORA38.1-201ENST00000364172 131 ntBASIC0.81□□□□□ -2.28
RPS28P62857 RNU6-575P-201ENST00000411326 105 ntBASIC0.81□□□□□ -2.28
RPS28P62857 CST2P1-201ENST00000425770 87 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AL035407.1-201ENST00000429211 571 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AC104058.1-201ENST00000448028 297 ntBASIC0.81□□□□□ -2.28
RPS28P62857 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC0.81□□□□□ -2.28
RPS28P62857 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC0.81□□□□□ -2.28
RPS28P62857 RPL30P9-201ENST00000465586 330 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AC010409.1-201ENST00000487382 476 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC0.81□□□□□ -2.28
RPS28P62857 HMGN1P13-201ENST00000505795 138 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AP001189.2-201ENST00000527320 189 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.81□□□□□ -2.28
RPS28P62857 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
RPS28P62857 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.81□□□□□ -2.28
RPS28P62857 AC136932.1-201ENST00000574771 208 ntBASIC0.81□□□□□ -2.28
RPS28P62857 ELOCP29-201ENST00000588193 334 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.81□□□□□ -2.28
RPS28P62857 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.81□□□□□ -2.28
RPS28P62857 NIFKP6-201ENST00000598115 845 ntBASIC0.81□□□□□ -2.28
RPS28P62857 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.81□□□□□ -2.28
RPS28P62857 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
RPS28P62857 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
RPS28P62857 AC233981.2-201ENST00000611524 1614 ntBASIC0.8□□□□□ -2.28
RPS28P62857 Y_RNA.25-201ENST00000362528 102 ntBASIC0.8□□□□□ -2.28
RPS28P62857 SNORD114-19-201ENST00000363072 75 ntBASIC0.8□□□□□ -2.28
RPS28P62857 RNU1-140P-201ENST00000365040 165 ntBASIC0.8□□□□□ -2.28
RPS28P62857 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RPS28P62857 AL590084.2-201ENST00000401481 382 ntBASIC0.8□□□□□ -2.28
RPS28P62857 MIR1304-201ENST00000408243 91 ntBASIC0.8□□□□□ -2.28
RPS28P62857 MIR1285-1-201ENST00000408593 84 ntBASIC0.8□□□□□ -2.28
RPS28P62857 RN7SKP101-201ENST00000411376 320 ntBASIC0.8□□□□□ -2.28
RPS28P62857 OR51A5P-201ENST00000415429 942 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.8□□□□□ -2.28
RPS28P62857 TOMM20P4-201ENST00000427861 435 ntBASIC0.8□□□□□ -2.28
RPS28P62857 GTF2IP3-201ENST00000433887 494 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC105272.1-201ENST00000438604 198 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC0.8□□□□□ -2.28
RPS28P62857 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.8□□□□□ -2.28
RPS28P62857 COX6CP18-201ENST00000448769 222 ntBASIC0.8□□□□□ -2.28
RPS28P62857 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RPS28P62857 BX510359.1-201ENST00000456973 237 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC0.8□□□□□ -2.28
RPS28P62857 AC079140.2-201ENST00000506193 142 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC234781.5-201ENST00000508429 271 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC110760.3-202ENST00000515177 371 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
RPS28P62857 AC012065.4-201ENST00000602445 679 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC068790.4-201ENST00000602474 263 ntBASIC0.8□□□□□ -2.28
RPS28P62857 AC067959.1-201ENST00000604334 379 ntBASIC0.8□□□□□ -2.28
RPS28P62857 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RPS28P62857 AL121772.2-201ENST00000614331 297 ntBASIC0.8□□□□□ -2.28
RPS28P62857 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RPS28P62857 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RPS28P62857 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RPS28P62857 RNU6-97P-201ENST00000363387 104 ntBASIC0.79□□□□□ -2.28
RPS28P62857 RNA5SP515-201ENST00000364570 118 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms