Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERVFC1P60507 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ERVFC1P60507 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.42□□□□□ -1.7
ERVFC1P60507 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ERVFC1P60507 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ERVFC1P60507 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
ERVFC1P60507 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERVFC1P60507 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERVFC1P60507 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RNY1P16-201ENST00000363063 111 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RNU6-611P-201ENST00000384276 104 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RNU6-817P-201ENST00000391083 104 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 SNORD58.1-201ENST00000391313 66 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 MIR548H3-201ENST00000408771 118 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RAB9AP3-201ENST00000412737 573 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 AC092809.3-201ENST00000415453 231 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RAC1P3-201ENST00000416129 580 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 AC073063.1-201ENST00000434352 607 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RPL23AP46-201ENST00000438548 490 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RPS26P2-201ENST00000440331 348 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RAB9AP1-201ENST00000449393 573 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 RPL7P5-201ENST00000471472 736 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 TRBVB-201ENST00000477100 408 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.42□□□□□ -1.7
ERVFC1P60507 IGKV2D-23-201ENST00000518179 286 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 AC109329.1-201ENST00000518744 317 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 AC087369.1-201ENST00000520775 996 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 AP003733.2-201ENST00000529409 171 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
ERVFC1P60507 SNORD91B-202ENST00000608459 222 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 MIR8069-1-201ENST00000616627 86 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 MIR8069-2-201ENST00000621412 86 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERVFC1P60507 ZNF72P-201ENST00000425869 1908 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 AL139811.1-201ENST00000424779 2299 ntBASIC4.42□□□□□ -1.7
ERVFC1P60507 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERVFC1P60507 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
ERVFC1P60507 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ERVFC1P60507 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.41□□□□□ -1.7
ERVFC1P60507 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ERVFC1P60507 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERVFC1P60507 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
ERVFC1P60507 RNU6-746P-201ENST00000384112 109 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 MIR449B-201ENST00000384995 97 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AL445529.1-201ENST00000398713 389 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 RNU2-71P-201ENST00000411395 189 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AL030996.1-201ENST00000411430 235 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 HSPE1P12-201ENST00000412576 301 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC093578.1-201ENST00000415219 368 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 CRYBB2P1-203ENST00000415709 538 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 MTCO3P19-201ENST00000415864 321 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 AL691449.1-201ENST00000426570 421 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 SDAD1P3-201ENST00000427380 333 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 YME1L1P1-201ENST00000429435 297 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC004383.1-201ENST00000438135 289 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 LINC01399-202ENST00000458450 244 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 RPL21P41-201ENST00000459863 264 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC069499.1-201ENST00000489433 509 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC110792.1-201ENST00000491826 472 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 SNORA31.3-201ENST00000516029 96 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 RNU5B-3P-201ENST00000516601 115 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 IGKV2D-36-201ENST00000518643 226 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC144568.1-201ENST00000520139 137 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.41□□□□□ -1.7
ERVFC1P60507 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.41□□□□□ -1.7
ERVFC1P60507 AL160281.1-201ENST00000605307 311 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AC006023.2-201ENST00000609916 167 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 AL354798.1-201ENST00000622505 329 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.41□□□□□ -1.7
ERVFC1P60507 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ERVFC1P60507 AC106871.1-201ENST00000568324 3102 ntBASIC4.41□□□□□ -1.7
ERVFC1P60507 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
ERVFC1P60507 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ERVFC1P60507 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERVFC1P60507 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERVFC1P60507 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
ERVFC1P60507 MAPK10-286ENST00000641208 8747 ntBASIC4.4□□□□□ -1.7
ERVFC1P60507 AC005183.1-201ENST00000603687 1979 ntBASIC4.4□□□□□ -1.7
ERVFC1P60507 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ERVFC1P60507 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERVFC1P60507 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ERVFC1P60507 RNY1-201ENST00000364228 113 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 RNU6-213P-201ENST00000384051 104 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 MIR625-201ENST00000385047 85 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 RNU6-821P-201ENST00000390995 107 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 SAR1AP2-201ENST00000392696 594 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 AL353997.1-201ENST00000432936 108 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 TBCAP1-201ENST00000436520 327 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 NDUFB1P2-201ENST00000449477 176 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 BX276092.4-201ENST00000452056 248 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 PRELID3BP1-201ENST00000457142 540 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms