Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-685P-201ENST00000517088 95 ntBASIC2.9□□□□□ -1.95
CDH13P55290 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CDH13P55290 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 MTCYBP20-201ENST00000524239 1129 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 H3F3AP1-201ENST00000559984 334 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
CDH13P55290 AC008521.1-201ENST00000587471 187 ntBASIC2.9□□□□□ -1.95
CDH13P55290 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH13P55290 AC091805.2-201ENST00000603848 235 ntBASIC2.9□□□□□ -1.95
CDH13P55290 MTND4LP5-201ENST00000605152 292 ntBASIC2.9□□□□□ -1.95
CDH13P55290 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CDH13P55290 Z99129.1-201ENST00000612510 255 ntBASIC2.9□□□□□ -1.95
CDH13P55290 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH13P55290 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH13P55290 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CDH13P55290 MTND4P35-201ENST00000604257 1375 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AP003122.5-201ENST00000527668 3766 ntBASIC2.89□□□□□ -1.95
CDH13P55290 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH13P55290 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CDH13P55290 OR5H15-201ENST00000383696 930 ntBASIC2.89□□□□□ -1.95
CDH13P55290 SNORA54-201ENST00000384281 123 ntBASIC2.89□□□□□ -1.95
CDH13P55290 Y_RNA.559-201ENST00000384686 107 ntBASIC2.89□□□□□ -1.95
CDH13P55290 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDH13P55290 RNA5SP354-201ENST00000391247 136 ntBASIC2.89□□□□□ -1.95
CDH13P55290 GSTA9P-201ENST00000406231 611 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH13P55290 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH13P55290 MTCO2P7-201ENST00000446518 666 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 RPS29P12-201ENST00000460178 152 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AC128713.1-201ENST00000471495 306 ntBASIC2.89□□□□□ -1.95
CDH13P55290 RPS29P20-201ENST00000489592 171 ntBASIC2.89□□□□□ -1.95
CDH13P55290 RN7SL504P-201ENST00000494496 287 ntBASIC2.89□□□□□ -1.95
CDH13P55290 RPS27P26-201ENST00000494583 239 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AC098591.2-201ENST00000510152 315 ntBASIC2.89□□□□□ -1.95
CDH13P55290 SNORA31.26-201ENST00000517250 137 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AP003392.2-201ENST00000527269 208 ntBASIC2.89□□□□□ -1.95
CDH13P55290 OR4R1P-201ENST00000529879 463 ntBASIC2.89□□□□□ -1.95
CDH13P55290 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH13P55290 AL157871.3-201ENST00000557231 293 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 AC025281.1-201ENST00000567026 265 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AC010653.1-201ENST00000571108 881 ntBASIC2.89□□□□□ -1.95
CDH13P55290 MIR3944-201ENST00000581277 108 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH13P55290 AC103987.3-201ENST00000582071 292 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AC012119.1-201ENST00000603184 222 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AL022154.1-201ENST00000604698 785 ntBASIC2.89□□□□□ -1.95
CDH13P55290 uc_338.11-201ENST00000619132 160 ntBASIC2.89□□□□□ -1.95
CDH13P55290 AL157786.1-207ENST00000627771 695 ntBASIC2.89□□□□□ -1.95
CDH13P55290 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH13P55290 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH13P55290 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RNU6-1120P-201ENST00000362988 108 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RNU4-48P-201ENST00000365559 182 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RNU6-395P-201ENST00000365662 106 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH13P55290 Y_RNA.436-201ENST00000384097 102 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RNU6-606P-201ENST00000384721 111 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RNVU1-14-201ENST00000384770 164 ntBASIC2.88□□□□□ -1.95
CDH13P55290 MIR1-2-201ENST00000384961 85 ntBASIC2.88□□□□□ -1.95
CDH13P55290 U3.19-201ENST00000390893 196 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RNU2-66P-201ENST00000410650 161 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH13P55290 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH13P55290 AL353729.1-201ENST00000425044 720 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC098614.2-201ENST00000426040 255 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC010975.2-201ENST00000427781 588 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH13P55290 AC093392.2-201ENST00000450682 337 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RNU7-182P-201ENST00000459009 62 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC117440.1-201ENST00000474107 571 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RPS29P2-201ENST00000479278 136 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC139453.3-201ENST00000493276 369 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AL358832.1-201ENST00000497800 389 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC108078.1-201ENST00000508073 725 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH13P55290 RNU6-123P-201ENST00000516163 102 ntBASIC2.88□□□□□ -1.95
CDH13P55290 RN7SKP272-201ENST00000516988 232 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC009902.1-201ENST00000519351 183 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH13P55290 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDH13P55290 RANP3-201ENST00000530970 276 ntBASIC2.88□□□□□ -1.95
CDH13P55290 OR5BN1P-201ENST00000532955 829 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC007536.1-201ENST00000533382 349 ntBASIC2.88□□□□□ -1.95
CDH13P55290 SUB1P2-201ENST00000556401 297 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH13P55290 MTND1P15-201ENST00000579262 949 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH13P55290 AC007938.3-201ENST00000604965 623 ntBASIC2.88□□□□□ -1.95
CDH13P55290 Z84480.1-201ENST00000605131 311 ntBASIC2.88□□□□□ -1.95
CDH13P55290 AL020991.1-201ENST00000612314 373 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms