Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC007938.3-201ENST00000604965 623 ntBASIC2.71□□□□□ -1.98
VCPP55072 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
VCPP55072 AC097520.1-201ENST00000624435 385 ntBASIC2.71□□□□□ -1.98
VCPP55072 AC097655.1-201ENST00000635075 318 ntBASIC2.71□□□□□ -1.98
VCPP55072 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPP55072 AC006020.1-201ENST00000420179 1854 ntBASIC2.71□□□□□ -1.98
VCPP55072 RNU5F-6P-201ENST00000362979 116 ntBASIC2.7□□□□□ -1.98
VCPP55072 AF228730.1-201ENST00000397972 663 ntBASIC2.7□□□□□ -1.98
VCPP55072 MTCYBP36-201ENST00000404146 440 ntBASIC2.7□□□□□ -1.98
VCPP55072 AL513475.1-201ENST00000406602 315 ntBASIC2.7□□□□□ -1.98
VCPP55072 RN7SKP140-201ENST00000411196 284 ntBASIC2.7□□□□□ -1.98
VCPP55072 RPL21P24-201ENST00000413752 448 ntBASIC2.7□□□□□ -1.98
VCPP55072 Z99497.1-201ENST00000421282 135 ntBASIC2.7□□□□□ -1.98
VCPP55072 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.7□□□□□ -1.98
VCPP55072 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.7□□□□□ -1.98
VCPP55072 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.7□□□□□ -1.98
VCPP55072 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.7□□□□□ -1.98
VCPP55072 AC118469.1-201ENST00000442943 488 ntBASIC2.7□□□□□ -1.98
VCPP55072 HIGD1AP2-201ENST00000446367 280 ntBASIC2.7□□□□□ -1.98
VCPP55072 DPPA3P1-201ENST00000448050 469 ntBASIC2.7□□□□□ -1.98
VCPP55072 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.7□□□□□ -1.98
VCPP55072 AC027673.1-201ENST00000456245 405 ntBASIC2.7□□□□□ -1.98
VCPP55072 AC126182.1-201ENST00000478134 357 ntBASIC2.7□□□□□ -1.98
VCPP55072 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VCPP55072 RPF2P2-201ENST00000504693 896 ntBASIC2.7□□□□□ -1.98
VCPP55072 RNA5SP320-201ENST00000516263 124 ntBASIC2.7□□□□□ -1.98
VCPP55072 NRON-201ENST00000517270 370 ntBASIC2.7□□□□□ -1.98
VCPP55072 COX6CP5-201ENST00000527162 228 ntBASIC2.7□□□□□ -1.98
VCPP55072 RANP3-201ENST00000530970 276 ntBASIC2.7□□□□□ -1.98
VCPP55072 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.7□□□□□ -1.98
VCPP55072 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
VCPP55072 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.7□□□□□ -1.98
VCPP55072 AL356432.3-201ENST00000568952 465 ntBASIC2.7□□□□□ -1.98
VCPP55072 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VCPP55072 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.7□□□□□ -1.98
VCPP55072 SDR42E1P2-201ENST00000614861 481 ntBASIC2.7□□□□□ -1.98
VCPP55072 AC019226.2-201ENST00000625973 424 ntBASIC2.7□□□□□ -1.98
VCPP55072 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.7□□□□□ -1.98
VCPP55072 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VCPP55072 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VCPP55072 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCPP55072 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCPP55072 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCPP55072 MAPK10-266ENST00000641066 6555 ntBASIC2.69□□□□□ -1.98
VCPP55072 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCPP55072 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VCPP55072 SNORD114-1-201ENST00000362705 72 ntBASIC2.69□□□□□ -1.98
VCPP55072 RNU5A-8P-201ENST00000364102 114 ntBASIC2.69□□□□□ -1.98
VCPP55072 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.69□□□□□ -1.98
VCPP55072 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VCPP55072 RNU6-278P-201ENST00000390945 109 ntBASIC2.69□□□□□ -1.98
VCPP55072 DPH3P2-201ENST00000422618 250 ntBASIC2.69□□□□□ -1.98
VCPP55072 USP12PX-201ENST00000432383 1057 ntBASIC2.69□□□□□ -1.98
VCPP55072 CETN4P-201ENST00000432407 469 ntBASIC2.69□□□□□ -1.98
VCPP55072 AL445567.1-201ENST00000439121 144 ntBASIC2.69□□□□□ -1.98
VCPP55072 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.69□□□□□ -1.98
VCPP55072 EPS15P1-201ENST00000448836 336 ntBASIC2.69□□□□□ -1.98
VCPP55072 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.69□□□□□ -1.98
VCPP55072 KATNBL1P6-201ENST00000453433 915 ntBASIC2.69□□□□□ -1.98
VCPP55072 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.69□□□□□ -1.98
VCPP55072 HMGN2P23-201ENST00000456759 269 ntBASIC2.69□□□□□ -1.98
VCPP55072 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.69□□□□□ -1.98
VCPP55072 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.69□□□□□ -1.98
VCPP55072 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.69□□□□□ -1.98
VCPP55072 SUMO2P6-201ENST00000505273 288 ntBASIC2.69□□□□□ -1.98
VCPP55072 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.69□□□□□ -1.98
VCPP55072 AC113155.1-201ENST00000511141 769 ntBASIC2.69□□□□□ -1.98
VCPP55072 AF131216.2-201ENST00000512316 564 ntBASIC2.69□□□□□ -1.98
VCPP55072 RNU6-390P-201ENST00000516259 103 ntBASIC2.69□□□□□ -1.98
VCPP55072 RN7SKP219-201ENST00000516825 296 ntBASIC2.69□□□□□ -1.98
VCPP55072 RNU6-201P-201ENST00000517100 61 ntBASIC2.69□□□□□ -1.98
VCPP55072 AC106038.2-201ENST00000520706 568 ntBASIC2.69□□□□□ -1.98
VCPP55072 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.69□□□□□ -1.98
VCPP55072 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.69□□□□□ -1.98
VCPP55072 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.69□□□□□ -1.98
VCPP55072 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.69□□□□□ -1.98
VCPP55072 AC009063.1-201ENST00000563342 702 ntBASIC2.69□□□□□ -1.98
VCPP55072 ROCK1P1-201ENST00000573767 549 ntBASIC2.69□□□□□ -1.98
VCPP55072 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.69□□□□□ -1.98
VCPP55072 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
VCPP55072 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.69□□□□□ -1.98
VCPP55072 AC008147.4-201ENST00000617570 1204 ntBASIC2.69□□□□□ -1.98
VCPP55072 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VCPP55072 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCPP55072 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCPP55072 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.68□□□□□ -1.98
VCPP55072 RNU5F-7P-201ENST00000363696 115 ntBASIC2.68□□□□□ -1.98
VCPP55072 SNORA68.1-201ENST00000364537 132 ntBASIC2.68□□□□□ -1.98
VCPP55072 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
VCPP55072 RNU6-533P-201ENST00000384144 107 ntBASIC2.68□□□□□ -1.98
VCPP55072 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.68□□□□□ -1.98
VCPP55072 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.68□□□□□ -1.98
VCPP55072 AL451054.2-201ENST00000420896 202 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC098614.2-201ENST00000426040 255 ntBASIC2.68□□□□□ -1.98
VCPP55072 RPL22P17-201ENST00000438729 315 ntBASIC2.68□□□□□ -1.98
VCPP55072 AL445687.1-201ENST00000439946 251 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC005094.1-201ENST00000440420 368 ntBASIC2.68□□□□□ -1.98
VCPP55072 MTND1P30-201ENST00000441241 901 ntBASIC2.68□□□□□ -1.98
VCPP55072 CBWD4P-201ENST00000445695 655 ntBASIC2.68□□□□□ -1.98
VCPP55072 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms