Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AP004371.1-201ENST00000525240 214 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC109635.4-202ENST00000531666 412 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC006270.2-201ENST00000578523 652 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.63□□□□□ -1.83
COPB1P53618 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.63□□□□□ -1.83
COPB1P53618 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AL353621.2-201ENST00000605340 133 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AL132765.2-201ENST00000610812 351 ntBASIC3.63□□□□□ -1.83
COPB1P53618 uc_338.1-201ENST00000612113 180 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AL589994.2-201ENST00000621124 579 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC007998.5-201ENST00000622938 237 ntBASIC3.63□□□□□ -1.83
COPB1P53618 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.63□□□□□ -1.83
COPB1P53618 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COPB1P53618 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.62□□□□□ -1.83
COPB1P53618 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COPB1P53618 RNU6-335P-201ENST00000364563 113 ntBASIC3.62□□□□□ -1.83
COPB1P53618 RNU4-66P-201ENST00000365199 138 ntBASIC3.62□□□□□ -1.83
COPB1P53618 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 SNORA36C-201ENST00000384289 132 ntBASIC3.62□□□□□ -1.83
COPB1P53618 MIR218-2-201ENST00000385006 110 ntBASIC3.62□□□□□ -1.83
COPB1P53618 RNU6-510P-201ENST00000391239 108 ntBASIC3.62□□□□□ -1.83
COPB1P53618 EEF1A1P40-201ENST00000412883 573 ntBASIC3.62□□□□□ -1.83
COPB1P53618 OR6C66P-201ENST00000414917 930 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC009161.1-201ENST00000417306 376 ntBASIC3.62□□□□□ -1.83
COPB1P53618 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 AC008850.1-201ENST00000427546 362 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC020550.1-201ENST00000447385 163 ntBASIC3.62□□□□□ -1.83
COPB1P53618 HMGN2P21-201ENST00000447764 270 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC115115.1-201ENST00000449927 248 ntBASIC3.62□□□□□ -1.83
COPB1P53618 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.62□□□□□ -1.83
COPB1P53618 SNRPFP3-201ENST00000457792 225 ntBASIC3.62□□□□□ -1.83
COPB1P53618 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 RPS27P29-201ENST00000463110 252 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
COPB1P53618 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 MTCO3P9-201ENST00000506989 781 ntBASIC3.62□□□□□ -1.83
COPB1P53618 FAM206BP-201ENST00000510179 541 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 SNORA31.3-201ENST00000516029 96 ntBASIC3.62□□□□□ -1.83
COPB1P53618 SNORA31.20-201ENST00000517111 133 ntBASIC3.62□□□□□ -1.83
COPB1P53618 BTF3P12-201ENST00000519620 469 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC087241.2-201ENST00000535801 324 ntBASIC3.62□□□□□ -1.83
COPB1P53618 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.62□□□□□ -1.83
COPB1P53618 ZNF192P1-203ENST00000565888 810 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.62□□□□□ -1.83
COPB1P53618 MIR5583-1-201ENST00000580941 59 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.62□□□□□ -1.83
COPB1P53618 AL121757.2-201ENST00000611223 313 ntBASIC3.62□□□□□ -1.83
COPB1P53618 AC010133.1-201ENST00000615809 842 ntBASIC3.62□□□□□ -1.83
COPB1P53618 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COPB1P53618 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
COPB1P53618 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.62□□□□□ -1.83
COPB1P53618 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.62□□□□□ -1.83
COPB1P53618 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
COPB1P53618 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.61□□□□□ -1.83
COPB1P53618 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPB1P53618 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPB1P53618 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
COPB1P53618 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COPB1P53618 RNU6-831P-201ENST00000384548 107 ntBASIC3.61□□□□□ -1.83
COPB1P53618 RNU6-550P-201ENST00000391057 101 ntBASIC3.61□□□□□ -1.83
COPB1P53618 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COPB1P53618 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AL122016.1-201ENST00000403365 367 ntBASIC3.61□□□□□ -1.83
COPB1P53618 RNU4-26P-201ENST00000410270 107 ntBASIC3.61□□□□□ -1.83
COPB1P53618 RNA5SP229-201ENST00000410809 99 ntBASIC3.61□□□□□ -1.83
COPB1P53618 MTND3P8-201ENST00000412909 339 ntBASIC3.61□□□□□ -1.83
COPB1P53618 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.61□□□□□ -1.83
COPB1P53618 AC073063.1-201ENST00000434352 607 ntBASIC3.61□□□□□ -1.83
COPB1P53618 RPL21P112-201ENST00000434403 463 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AC024082.2-201ENST00000434771 238 ntBASIC3.61□□□□□ -1.83
COPB1P53618 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.61□□□□□ -1.83
COPB1P53618 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.61□□□□□ -1.83
COPB1P53618 CYCSP35-201ENST00000451978 304 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AL590639.1-201ENST00000456484 337 ntBASIC3.61□□□□□ -1.83
COPB1P53618 RNU6-329P-201ENST00000459618 107 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AC007547.1-201ENST00000462177 490 ntBASIC3.61□□□□□ -1.83
COPB1P53618 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.61□□□□□ -1.83
COPB1P53618 AC106707.2-201ENST00000484182 374 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.61□□□□□ -1.83
COPB1P53618 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.61□□□□□ -1.83
COPB1P53618 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.61□□□□□ -1.83
COPB1P53618 RNU4-49P-201ENST00000516080 140 ntBASIC3.61□□□□□ -1.83
COPB1P53618 RNU6-390P-201ENST00000516259 103 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AC105029.1-201ENST00000520250 669 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AL137161.1-201ENST00000532231 390 ntBASIC3.61□□□□□ -1.83
COPB1P53618 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.61□□□□□ -1.83
COPB1P53618 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.61□□□□□ -1.83
COPB1P53618 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.61□□□□□ -1.83
COPB1P53618 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.61□□□□□ -1.83
COPB1P53618 AC037471.2-201ENST00000564941 598 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.61□□□□□ -1.83
COPB1P53618 AC005951.2-201ENST00000576282 495 ntBASIC3.61□□□□□ -1.83
COPB1P53618 SNRPGP15-201ENST00000600149 222 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AC174048.1-201ENST00000603389 144 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AC007619.2-201ENST00000605743 379 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AL365204.3-201ENST00000612448 685 ntBASIC3.61□□□□□ -1.83
COPB1P53618 AL390240.1-201ENST00000612950 384 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms