Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.38□□□□□ -2.19
NUP98P52948 AL096840.1-201ENST00000603287 93 ntBASIC1.38□□□□□ -2.19
NUP98P52948 AC025588.2-201ENST00000604851 466 ntBASIC1.38□□□□□ -2.19
NUP98P52948 AC098657.3-201ENST00000620434 263 ntBASIC1.38□□□□□ -2.19
NUP98P52948 AC097655.1-201ENST00000635075 318 ntBASIC1.38□□□□□ -2.19
NUP98P52948 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.38□□□□□ -2.19
NUP98P52948 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
NUP98P52948 OR1L1-202ENST00000373686 1083 ntBASIC1.38□□□□□ -2.19
NUP98P52948 MIR613-201ENST00000385248 95 ntBASIC1.38□□□□□ -2.19
NUP98P52948 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NUP98P52948 AL139098.1-201ENST00000407291 389 ntBASIC1.38□□□□□ -2.19
NUP98P52948 FCF1P2-201ENST00000415284 583 ntBASIC1.38□□□□□ -2.19
NUP98P52948 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP98P52948 RPL31P63-201ENST00000422565 375 ntBASIC1.38□□□□□ -2.19
NUP98P52948 MOB1AP2-201ENST00000446060 614 ntBASIC1.38□□□□□ -2.19
NUP98P52948 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.38□□□□□ -2.19
NUP98P52948 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP98P52948 AP1S2P1-201ENST00000457344 379 ntBASIC1.38□□□□□ -2.19
NUP98P52948 RPS20P20-201ENST00000460498 340 ntBASIC1.38□□□□□ -2.19
NUP98P52948 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP98P52948 AC013828.1-201ENST00000481845 158 ntBASIC1.38□□□□□ -2.19
NUP98P52948 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.38□□□□□ -2.19
NUP98P52948 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP98P52948 SULT1C2P1-202ENST00000562418 459 ntBASIC1.38□□□□□ -2.19
NUP98P52948 AC093519.1-201ENST00000566109 298 ntBASIC1.38□□□□□ -2.19
NUP98P52948 AC097468.3-201ENST00000607956 456 ntBASIC1.38□□□□□ -2.19
NUP98P52948 AC022709.1-201ENST00000615967 87 ntBASIC1.38□□□□□ -2.19
NUP98P52948 U6.101-201ENST00000637707 76 ntBASIC1.38□□□□□ -2.19
NUP98P52948 ZNF849P-201ENST00000594711 1566 ntBASIC1.37□□□□□ -2.19
NUP98P52948 MTND5P11-201ENST00000511037 1812 ntBASIC1.37□□□□□ -2.19
NUP98P52948 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
NUP98P52948 MIR514A1-201ENST00000385133 98 ntBASIC1.37□□□□□ -2.19
NUP98P52948 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NUP98P52948 U6atac.2-201ENST00000408644 118 ntBASIC1.37□□□□□ -2.19
NUP98P52948 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.37□□□□□ -2.19
NUP98P52948 RPS24P7-201ENST00000416921 246 ntBASIC1.37□□□□□ -2.19
NUP98P52948 CYCSP48-201ENST00000417124 323 ntBASIC1.37□□□□□ -2.19
NUP98P52948 PGBD4P6-201ENST00000421501 610 ntBASIC1.37□□□□□ -2.19
NUP98P52948 AL078601.1-201ENST00000444542 271 ntBASIC1.37□□□□□ -2.19
NUP98P52948 DDX3P2-201ENST00000446138 111 ntBASIC1.37□□□□□ -2.19
NUP98P52948 MTND3P4-201ENST00000453537 303 ntBASIC1.37□□□□□ -2.19
NUP98P52948 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NUP98P52948 LARP1BP2-201ENST00000486594 519 ntBASIC1.37□□□□□ -2.19
NUP98P52948 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NUP98P52948 CYCSP2-201ENST00000558168 301 ntBASIC1.37□□□□□ -2.19
NUP98P52948 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.37□□□□□ -2.19
NUP98P52948 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NUP98P52948 AP001269.3-201ENST00000588718 329 ntBASIC1.37□□□□□ -2.19
NUP98P52948 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.37□□□□□ -2.19
NUP98P52948 VN1R107P-201ENST00000601784 209 ntBASIC1.37□□□□□ -2.19
NUP98P52948 AC020658.4-201ENST00000613987 684 ntBASIC1.37□□□□□ -2.19
NUP98P52948 MIR6130-201ENST00000619419 109 ntBASIC1.37□□□□□ -2.19
NUP98P52948 MIR6515-201ENST00000619843 57 ntBASIC1.37□□□□□ -2.19
NUP98P52948 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.37□□□□□ -2.19
NUP98P52948 AC025048.6-202ENST00000627667 438 ntBASIC1.37□□□□□ -2.19
NUP98P52948 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
NUP98P52948 SNORD115-48-201ENST00000364764 76 ntBASIC1.36□□□□□ -2.19
NUP98P52948 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
NUP98P52948 RNU6-741P-201ENST00000383889 107 ntBASIC1.36□□□□□ -2.19
NUP98P52948 RNU6-1083P-201ENST00000384022 107 ntBASIC1.36□□□□□ -2.19
NUP98P52948 RNU6-140P-201ENST00000384566 108 ntBASIC1.36□□□□□ -2.19
NUP98P52948 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.36□□□□□ -2.19
NUP98P52948 NDUFB4P7-201ENST00000423198 363 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AL590383.1-201ENST00000428602 75 ntBASIC1.36□□□□□ -2.19
NUP98P52948 MTND2P6-201ENST00000455337 1030 ntBASIC1.36□□□□□ -2.19
NUP98P52948 RPL30P12-201ENST00000474666 353 ntBASIC1.36□□□□□ -2.19
NUP98P52948 LTV1P1-201ENST00000510683 1237 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.36□□□□□ -2.19
NUP98P52948 AP005597.4-201ENST00000526762 229 ntBASIC1.36□□□□□ -2.19
NUP98P52948 MIR151B-201ENST00000584249 96 ntBASIC1.36□□□□□ -2.19
NUP98P52948 FAM106DP-201ENST00000586416 501 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AL450336.1-201ENST00000605180 586 ntBASIC1.36□□□□□ -2.19
NUP98P52948 uc_338.14-201ENST00000613162 166 ntBASIC1.36□□□□□ -2.19
NUP98P52948 RMST_10.1-201ENST00000616309 154 ntBASIC1.36□□□□□ -2.19
NUP98P52948 MIR6734-201ENST00000621166 68 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AC007785.2-201ENST00000598627 1916 ntBASIC1.36□□□□□ -2.19
NUP98P52948 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.36□□□□□ -2.19
NUP98P52948 ZNF702P-202ENST00000434269 1966 ntBASIC1.36□□□□□ -2.19
NUP98P52948 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
NUP98P52948 MIR373-201ENST00000362273 69 ntBASIC1.36□□□□□ -2.19
NUP98P52948 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
NUP98P52948 MTCO2P31-201ENST00000402702 684 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.36□□□□□ -2.19
NUP98P52948 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.36□□□□□ -2.19
NUP98P52948 RPS15AP5-201ENST00000436276 388 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.36□□□□□ -2.19
NUP98P52948 DYNLL1P5-201ENST00000467158 270 ntBASIC1.36□□□□□ -2.19
NUP98P52948 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.36□□□□□ -2.19
NUP98P52948 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.36□□□□□ -2.19
NUP98P52948 AP005660.1-201ENST00000522972 293 ntBASIC1.36□□□□□ -2.19
NUP98P52948 HSPA8P13-201ENST00000523715 472 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AL133241.1-201ENST00000556832 487 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AL109918.3-201ENST00000603072 338 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AP000403.1-201ENST00000603349 851 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AL627230.6-201ENST00000611129 280 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AC021755.4-201ENST00000616620 456 ntBASIC1.36□□□□□ -2.19
NUP98P52948 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.36□□□□□ -2.19
NUP98P52948 AC004009.2-201ENST00000623016 728 ntBASIC1.36□□□□□ -2.19
NUP98P52948 MTND1P37-201ENST00000636562 264 ntBASIC1.36□□□□□ -2.19
NUP98P52948 DBF4P1-201ENST00000412976 1892 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms