Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.43□□□□□ -2.02
MSH6P52701 AC090186.1-201ENST00000605991 572 ntBASIC2.43□□□□□ -2.02
MSH6P52701 AC024560.3-201ENST00000608482 349 ntBASIC2.43□□□□□ -2.02
MSH6P52701 AC092447.10-201ENST00000620607 1652 ntBASIC2.43□□□□□ -2.02
MSH6P52701 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
MSH6P52701 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
MSH6P52701 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
MSH6P52701 RNU6-777P-201ENST00000364265 104 ntBASIC2.42□□□□□ -2.02
MSH6P52701 RNU6-744P-201ENST00000365557 107 ntBASIC2.42□□□□□ -2.02
MSH6P52701 RNU6-1316P-201ENST00000384242 108 ntBASIC2.42□□□□□ -2.02
MSH6P52701 RNU6-636P-201ENST00000384598 107 ntBASIC2.42□□□□□ -2.02
MSH6P52701 RNU6-114P-201ENST00000384704 105 ntBASIC2.42□□□□□ -2.02
MSH6P52701 MIR613-201ENST00000385248 95 ntBASIC2.42□□□□□ -2.02
MSH6P52701 ANAPC10P1-201ENST00000395991 556 ntBASIC2.42□□□□□ -2.02
MSH6P52701 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.42□□□□□ -2.02
MSH6P52701 AL513331.1-201ENST00000411908 397 ntBASIC2.42□□□□□ -2.02
MSH6P52701 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH6P52701 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.42□□□□□ -2.02
MSH6P52701 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH6P52701 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.42□□□□□ -2.02
MSH6P52701 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH6P52701 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH6P52701 AC084290.1-201ENST00000434995 374 ntBASIC2.42□□□□□ -2.02
MSH6P52701 BNIP3P2-201ENST00000441221 577 ntBASIC2.42□□□□□ -2.02
MSH6P52701 PTENP1-201ENST00000447117 1215 ntBASIC2.42□□□□□ -2.02
MSH6P52701 MTCO1P27-201ENST00000448269 226 ntBASIC2.42□□□□□ -2.02
MSH6P52701 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
MSH6P52701 SSXP1-201ENST00000453640 473 ntBASIC2.42□□□□□ -2.02
MSH6P52701 USP9YP25-201ENST00000457708 443 ntBASIC2.42□□□□□ -2.02
MSH6P52701 RPL7P18-201ENST00000478965 734 ntBASIC2.42□□□□□ -2.02
MSH6P52701 AL135752.1-201ENST00000479477 471 ntBASIC2.42□□□□□ -2.02
MSH6P52701 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH6P52701 AC010587.2-201ENST00000511727 448 ntBASIC2.42□□□□□ -2.02
MSH6P52701 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.42□□□□□ -2.02
MSH6P52701 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.42□□□□□ -2.02
MSH6P52701 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH6P52701 AL592221.1-201ENST00000605266 382 ntBASIC2.42□□□□□ -2.02
MSH6P52701 AC140725.3-201ENST00000616193 880 ntBASIC2.42□□□□□ -2.02
MSH6P52701 AL159972.1-201ENST00000625150 448 ntBASIC2.42□□□□□ -2.02
MSH6P52701 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH6P52701 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.42□□□□□ -2.02
MSH6P52701 MTND4P1-201ENST00000457501 1466 ntBASIC2.41□□□□□ -2.02
MSH6P52701 RNU6-906P-201ENST00000384700 70 ntBASIC2.41□□□□□ -2.02
MSH6P52701 ELOCP9-201ENST00000418624 239 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AC008850.1-201ENST00000427546 362 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH6P52701 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.41□□□□□ -2.02
MSH6P52701 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH6P52701 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH6P52701 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH6P52701 AC090096.1-201ENST00000489168 390 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AL049874.1-201ENST00000489560 388 ntBASIC2.41□□□□□ -2.02
MSH6P52701 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MSH6P52701 AC147055.4-201ENST00000504399 745 ntBASIC2.41□□□□□ -2.02
MSH6P52701 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH6P52701 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH6P52701 RNU1-40P-201ENST00000516816 164 ntBASIC2.41□□□□□ -2.02
MSH6P52701 RNU1-97P-201ENST00000516872 164 ntBASIC2.41□□□□□ -2.02
MSH6P52701 SCARNA1-201ENST00000517138 166 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH6P52701 AC124947.2-202ENST00000552735 133 ntBASIC2.41□□□□□ -2.02
MSH6P52701 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH6P52701 AC007375.1-201ENST00000554513 578 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MSH6P52701 MTND1P8-201ENST00000571424 950 ntBASIC2.41□□□□□ -2.02
MSH6P52701 MIR5694-201ENST00000581190 76 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AL596327.1-201ENST00000603629 213 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AL645939.4-201ENST00000604495 135 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AC112220.3-201ENST00000605502 502 ntBASIC2.41□□□□□ -2.02
MSH6P52701 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MSH6P52701 AL161734.1-201ENST00000609720 557 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AC097478.2-201ENST00000610572 514 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AL133445.2-201ENST00000611191 527 ntBASIC2.41□□□□□ -2.02
MSH6P52701 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
MSH6P52701 AC009268.2-201ENST00000621925 457 ntBASIC2.41□□□□□ -2.02
MSH6P52701 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH6P52701 PABPC1P9-201ENST00000426076 1612 ntBASIC2.41□□□□□ -2.02
MSH6P52701 RNU6-1-201ENST00000383898 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-42P-201ENST00000384165 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-36P-201ENST00000384172 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-4P-201ENST00000384205 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-5P-201ENST00000384238 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-3P-201ENST00000384314 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-2-201ENST00000384627 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-9-201ENST00000384776 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-33P-201ENST00000384793 107 ntBASIC2.4□□□□□ -2.02
MSH6P52701 AC092047.1-201ENST00000424997 240 ntBASIC2.4□□□□□ -2.02
MSH6P52701 TXNL1P1-201ENST00000429528 554 ntBASIC2.4□□□□□ -2.02
MSH6P52701 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.4□□□□□ -2.02
MSH6P52701 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.4□□□□□ -2.02
MSH6P52701 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.4□□□□□ -2.02
MSH6P52701 ATG12P2-201ENST00000456830 416 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU1-123P-201ENST00000458950 160 ntBASIC2.4□□□□□ -2.02
MSH6P52701 snoU13.28-201ENST00000459235 104 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RPS20P20-201ENST00000460498 340 ntBASIC2.4□□□□□ -2.02
MSH6P52701 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-1256P-201ENST00000516539 103 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNA5SP102-201ENST00000516865 106 ntBASIC2.4□□□□□ -2.02
MSH6P52701 RNU6-928P-201ENST00000516876 104 ntBASIC2.4□□□□□ -2.02
MSH6P52701 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms