Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCNKAP51800 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC092809.3-201ENST00000415453 231 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 MTCYBP8-201ENST00000422855 651 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC091390.3-201ENST00000426478 338 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AC000111.3-201ENST00000433478 193 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AL162395.1-201ENST00000457882 422 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RPS20P20-201ENST00000460498 340 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RPL31P60-201ENST00000478450 367 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLCNKAP51800 AL359273.1-201ENST00000510918 627 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RNU6-1256P-201ENST00000516539 103 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RNU6-835P-201ENST00000516974 104 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RN7SKP258-201ENST00000517151 304 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AC068657.1-201ENST00000520807 306 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC004024.1-201ENST00000549244 247 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AC104458.1-201ENST00000608243 463 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AL354950.2-201ENST00000617939 290 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC025034.2-201ENST00000623264 286 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CLCNKAP51800 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCNKAP51800 AC233263.6-201ENST00000631132 1963 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLCNKAP51800 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLCNKAP51800 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.9
CLCNKAP51800 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CLCNKAP51800 RNU6-534P-201ENST00000364877 106 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 Y_RNA.295-201ENST00000364918 102 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCNKAP51800 SNORA69-201ENST00000383895 132 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 RNU6-1027P-201ENST00000383998 107 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 SNORA7.4-201ENST00000384249 137 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 RNU6-14P-201ENST00000384630 106 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCNKAP51800 RNU6-908P-201ENST00000410160 94 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCNKAP51800 GTF2IP20-201ENST00000431663 360 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 HMGB3P11-201ENST00000440127 604 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 DDX3P2-201ENST00000446138 111 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 AL356010.1-201ENST00000456364 102 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCNKAP51800 MTAPP1-201ENST00000489154 819 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 AC069439.1-201ENST00000494739 167 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
CLCNKAP51800 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCNKAP51800 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLCNKAP51800 RPS3AP4-201ENST00000555161 764 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 RPL23AP84-201ENST00000571193 464 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 MIR3921-201ENST00000577308 85 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 MIR4775-201ENST00000581168 75 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 AL162413.1-201ENST00000603198 110 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 AC090132.2-201ENST00000615881 347 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.15□□□□□ -1.91
CLCNKAP51800 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 AC006020.1-201ENST00000420179 1854 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 MTND5P17-201ENST00000418405 1603 ntBASIC3.15□□□□□ -1.91
CLCNKAP51800 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLCNKAP51800 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCNKAP51800 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CLCNKAP51800 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCNKAP51800 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCNKAP51800 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCNKAP51800 RNU6-1029P-201ENST00000384109 107 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 MIR493-201ENST00000385254 89 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AL139397.2-201ENST00000404529 772 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 U3.42-201ENST00000408746 214 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AL513331.1-201ENST00000411908 397 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCNKAP51800 ZNF90P2-204ENST00000419323 1075 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.14□□□□□ -1.91
CLCNKAP51800 RPL36AP6-201ENST00000435770 321 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCNKAP51800 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.14□□□□□ -1.91
CLCNKAP51800 FABP5P13-201ENST00000452144 328 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 RNU7-182P-201ENST00000459009 62 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AC092436.1-201ENST00000506450 503 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCNKAP51800 SNORA74D-201ENST00000516404 141 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 SCARNA15.2-201ENST00000516409 127 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.14□□□□□ -1.91
CLCNKAP51800 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCNKAP51800 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms