Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL121576.1-201ENST00000556055 276 ntBASIC3.72□□□□□ -1.81
CPT1AP50416 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.72□□□□□ -1.81
CPT1AP50416 BNIP3P10-201ENST00000605360 577 ntBASIC3.72□□□□□ -1.81
CPT1AP50416 AC022893.3-201ENST00000607665 437 ntBASIC3.72□□□□□ -1.81
CPT1AP50416 AC090132.2-201ENST00000615881 347 ntBASIC3.72□□□□□ -1.81
CPT1AP50416 AP003122.6-201ENST00000623831 495 ntBASIC3.72□□□□□ -1.81
CPT1AP50416 TPTE2P4-201ENST00000258589 1605 ntBASIC3.72□□□□□ -1.81
CPT1AP50416 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.72□□□□□ -1.81
CPT1AP50416 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CPT1AP50416 AC006504.1-201ENST00000562493 3666 ntBASIC3.72□□□□□ -1.81
CPT1AP50416 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CPT1AP50416 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
CPT1AP50416 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.71□□□□□ -1.81
CPT1AP50416 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CPT1AP50416 Y_RNA.86-201ENST00000363020 111 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 RNU6-283P-201ENST00000364788 107 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 RNU5E-4P-201ENST00000364931 120 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 DEFB109C-201ENST00000382575 264 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 DEFB109B-201ENST00000382656 264 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 RNU6-116P-201ENST00000384042 109 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.71□□□□□ -1.82
CPT1AP50416 AL139397.2-201ENST00000404529 772 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 RNA5SP111-201ENST00000411386 101 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 RPS12P24-201ENST00000412619 387 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.71□□□□□ -1.82
CPT1AP50416 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.71□□□□□ -1.82
CPT1AP50416 BTF3L4P3-201ENST00000418879 476 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.71□□□□□ -1.82
CPT1AP50416 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.71□□□□□ -1.82
CPT1AP50416 RNU7-180P-201ENST00000459240 63 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 AC087588.1-201ENST00000462203 316 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 AC006445.1-201ENST00000491925 405 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 AC005476.1-201ENST00000554427 397 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.71□□□□□ -1.82
CPT1AP50416 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.71□□□□□ -1.82
CPT1AP50416 AC005730.3-201ENST00000583067 366 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 AC092794.2-201ENST00000620933 563 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CPT1AP50416 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CPT1AP50416 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
CPT1AP50416 AC008568.2-201ENST00000623862 2313 ntBASIC3.71□□□□□ -1.82
CPT1AP50416 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 MIR422A-201ENST00000362286 90 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 Y_RNA.157-201ENST00000363638 102 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 RNU4-66P-201ENST00000365199 138 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 RNU4-20P-201ENST00000365601 151 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CPT1AP50416 CISD1P1-201ENST00000393907 327 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.7□□□□□ -1.82
CPT1AP50416 AL159169.1-201ENST00000421119 127 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 AL590383.1-201ENST00000428602 75 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 AL121601.2-201ENST00000438019 707 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 CBWD4P-201ENST00000445695 655 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 AC008264.1-201ENST00000447612 367 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.7□□□□□ -1.82
CPT1AP50416 RPL37P6-201ENST00000460682 294 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 RPS20P22-201ENST00000473700 357 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.7□□□□□ -1.82
CPT1AP50416 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.7□□□□□ -1.82
CPT1AP50416 CENPUP1-201ENST00000526649 1202 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.7□□□□□ -1.82
CPT1AP50416 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.7□□□□□ -1.82
CPT1AP50416 AL138889.2-201ENST00000603883 242 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 AL137843.1-201ENST00000605078 385 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.7□□□□□ -1.82
CPT1AP50416 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 AL157817.1-201ENST00000614264 790 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 uc_338.34-201ENST00000617467 174 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 XIST_intron.1-201ENST00000619444 68 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 AC022149.2-201ENST00000621061 203 ntBASIC3.7□□□□□ -1.82
CPT1AP50416 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CPT1AP50416 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
CPT1AP50416 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CPT1AP50416 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CPT1AP50416 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CPT1AP50416 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CPT1AP50416 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CPT1AP50416 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.69□□□□□ -1.82
CPT1AP50416 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CPT1AP50416 UBE2L2-201ENST00000254302 429 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 Y_RNA.231-201ENST00000364358 102 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 RNU6-332P-201ENST00000391193 108 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CPT1AP50416 AC080125.1-201ENST00000414888 684 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 Z85995.1-201ENST00000415547 335 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 RPL21P111-201ENST00000418453 477 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.69□□□□□ -1.82
CPT1AP50416 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.69□□□□□ -1.82
CPT1AP50416 SRIP2-201ENST00000428470 166 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 NEK4P1-201ENST00000433383 879 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.69□□□□□ -1.82
CPT1AP50416 MTND5P20-201ENST00000448677 143 ntBASIC3.69□□□□□ -1.82
CPT1AP50416 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms