Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC6.12□□□□□ -1.43
PSEN1P49768 AC245047.4-201ENST00000433189 144 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 RPS12P17-201ENST00000438591 377 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PSEN1P49768 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.12□□□□□ -1.43
PSEN1P49768 AC009237.8-201ENST00000445492 379 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 RPL26P9-201ENST00000457466 433 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.12□□□□□ -1.43
PSEN1P49768 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PSEN1P49768 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PSEN1P49768 AC018555.1-201ENST00000567548 1980 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.12□□□□□ -1.43
PSEN1P49768 MIR3614-201ENST00000581261 86 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 MIR4472-2-201ENST00000582069 67 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 AC120024.3-201ENST00000603167 156 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 uc_338.28-201ENST00000612082 187 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 UBE2Q2P6-201ENST00000612666 153 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC6.12□□□□□ -1.43
PSEN1P49768 CR381572.2-201ENST00000624852 397 ntBASIC6.12□□□□□ -1.43
PSEN1P49768 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.12□□□□□ -1.43
PSEN1P49768 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PSEN1P49768 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PSEN1P49768 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PSEN1P49768 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PSEN1P49768 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PSEN1P49768 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PSEN1P49768 AC138915.1-201ENST00000565427 1685 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 AC004076.2-201ENST00000620532 3323 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PSEN1P49768 Y_RNA.114-201ENST00000363265 113 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 RNU6-1164P-201ENST00000364428 107 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 RNU6-294P-201ENST00000364999 102 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 RNY3P5-201ENST00000384127 102 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 RN7SL346P-201ENST00000491561 294 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 RNU4-60P-201ENST00000517239 135 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 AC006115.2-201ENST00000596823 202 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 AC025946.2-201ENST00000603398 234 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PSEN1P49768 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.11□□□□□ -1.43
PSEN1P49768 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PSEN1P49768 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PSEN1P49768 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.1□□□□□ -1.43
PSEN1P49768 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PSEN1P49768 Z82209.1-201ENST00000422141 2135 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
PSEN1P49768 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PSEN1P49768 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 SNORD58C-201ENST00000365223 64 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 RNU1-100P-201ENST00000365255 165 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 Y_RNA.388-201ENST00000383919 113 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 SNORA20B-201ENST00000384220 132 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 SNORA17A-201ENST00000391185 133 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 MRPL53P1-201ENST00000414323 319 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 AC006517.1-201ENST00000480485 328 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC6.1□□□□□ -1.43
PSEN1P49768 MIR2117-201ENST00000516780 80 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC6.1□□□□□ -1.43
PSEN1P49768 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.1□□□□□ -1.43
PSEN1P49768 SNRPGP20-201ENST00000604477 205 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 RN7SL544P-201ENST00000617232 284 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 RN7SL763P-201ENST00000620922 284 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 SNORA17.5-201ENST00000630429 132 ntBASIC6.1□□□□□ -1.43
PSEN1P49768 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.1□□□□□ -1.43
PSEN1P49768 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PSEN1P49768 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.1□□□□□ -1.43
PSEN1P49768 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
PSEN1P49768 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PSEN1P49768 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.09□□□□□ -1.43
PSEN1P49768 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PSEN1P49768 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PSEN1P49768 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.09□□□□□ -1.43
PSEN1P49768 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.09□□□□□ -1.43
PSEN1P49768 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC6.09□□□□□ -1.43
PSEN1P49768 OR51H2P-202ENST00000641424 3046 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 RN7SKP224-201ENST00000364140 325 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 Y_RNA.310-201ENST00000365063 113 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.09□□□□□ -1.43
PSEN1P49768 RNA5SP122-201ENST00000384457 108 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC6.09□□□□□ -1.43
PSEN1P49768 TRBV5-2-201ENST00000489095 273 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 RNU1-103P-201ENST00000516502 125 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 SNORA31.20-201ENST00000517111 133 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC6.09□□□□□ -1.43
PSEN1P49768 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PSEN1P49768 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.09□□□□□ -1.43
PSEN1P49768 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PSEN1P49768 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.09□□□□□ -1.43
PSEN1P49768 AC000123.3-201ENST00000624029 4975 ntBASIC6.09□□□□□ -1.43
PSEN1P49768 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PSEN1P49768 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PSEN1P49768 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PSEN1P49768 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms