Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 DEFB108A-201ENST00000530110 222 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC013828.2-201ENST00000532487 235 ntBASIC2.15□□□□□ -2.07
RFX3P48380 MRPS36P5-201ENST00000551909 298 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC078814.3-201ENST00000553036 491 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC090888.2-201ENST00000559765 1144 ntBASIC2.15□□□□□ -2.07
RFX3P48380 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX3P48380 AL354943.1-201ENST00000572103 781 ntBASIC2.15□□□□□ -2.07
RFX3P48380 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
RFX3P48380 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX3P48380 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.15□□□□□ -2.07
RFX3P48380 AC025588.2-201ENST00000604851 466 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC007938.3-201ENST00000604965 623 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC091965.4-201ENST00000607691 587 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC067747.1-201ENST00000608026 250 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AP000240.1-201ENST00000609910 452 ntBASIC2.15□□□□□ -2.07
RFX3P48380 TUSC7.1-201ENST00000610969 165 ntBASIC2.15□□□□□ -2.07
RFX3P48380 DUSP12P1-201ENST00000612874 516 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AL139418.1-201ENST00000613613 177 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AL590808.1-201ENST00000618696 141 ntBASIC2.15□□□□□ -2.07
RFX3P48380 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RFX3P48380 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.15□□□□□ -2.07
RFX3P48380 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.14□□□□□ -2.07
RFX3P48380 SNORA3A-201ENST00000364113 130 ntBASIC2.14□□□□□ -2.07
RFX3P48380 OR5H15-201ENST00000383696 930 ntBASIC2.14□□□□□ -2.07
RFX3P48380 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RFX3P48380 AC119751.3-201ENST00000399720 670 ntBASIC2.14□□□□□ -2.07
RFX3P48380 RSL24D1P4-201ENST00000400938 484 ntBASIC2.14□□□□□ -2.07
RFX3P48380 RPL26P27-201ENST00000414397 437 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AC107081.1-201ENST00000414975 361 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX3P48380 RPS24P7-201ENST00000416921 246 ntBASIC2.14□□□□□ -2.07
RFX3P48380 CYCSP48-201ENST00000417124 323 ntBASIC2.14□□□□□ -2.07
RFX3P48380 ZNF90P2-204ENST00000419323 1075 ntBASIC2.14□□□□□ -2.07
RFX3P48380 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFX3P48380 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX3P48380 RPL30P4-201ENST00000429309 333 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFX3P48380 HIGD1AP2-201ENST00000446367 280 ntBASIC2.14□□□□□ -2.07
RFX3P48380 FABP5P15-201ENST00000453566 214 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AC139453.3-201ENST00000493276 369 ntBASIC2.14□□□□□ -2.07
RFX3P48380 GZMAP1-201ENST00000503054 631 ntBASIC2.14□□□□□ -2.07
RFX3P48380 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFX3P48380 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.14□□□□□ -2.07
RFX3P48380 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFX3P48380 RNA5SP281-201ENST00000516504 135 ntBASIC2.14□□□□□ -2.07
RFX3P48380 SCARNA3-201ENST00000517097 143 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX3P48380 AC006199.1-201ENST00000548728 219 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX3P48380 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX3P48380 MIR4999-201ENST00000585029 91 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AC091152.3-201ENST00000604227 325 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AC105148.1-201ENST00000604961 409 ntBASIC2.14□□□□□ -2.07
RFX3P48380 AC107952.2-201ENST00000606048 486 ntBASIC2.14□□□□□ -2.07
RFX3P48380 ZNF720P1-201ENST00000562403 1939 ntBASIC2.14□□□□□ -2.07
RFX3P48380 MTND4P35-201ENST00000604257 1375 ntBASIC2.13□□□□□ -2.07
RFX3P48380 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.13□□□□□ -2.07
RFX3P48380 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 RNA5SP125-201ENST00000364843 120 ntBASIC2.13□□□□□ -2.07
RFX3P48380 Y_RNA.302-201ENST00000364997 102 ntBASIC2.13□□□□□ -2.07
RFX3P48380 SNORA72.3-201ENST00000365074 132 ntBASIC2.13□□□□□ -2.07
RFX3P48380 RNU6-253P-201ENST00000384730 105 ntBASIC2.13□□□□□ -2.07
RFX3P48380 RNU4-72P-201ENST00000410754 173 ntBASIC2.13□□□□□ -2.07
RFX3P48380 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX3P48380 AC013410.2-201ENST00000422627 201 ntBASIC2.13□□□□□ -2.07
RFX3P48380 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 GPM6BP2-201ENST00000432046 144 ntBASIC2.13□□□□□ -2.07
RFX3P48380 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.13□□□□□ -2.07
RFX3P48380 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX3P48380 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.13□□□□□ -2.07
RFX3P48380 GPM6BP1-201ENST00000446387 144 ntBASIC2.13□□□□□ -2.07
RFX3P48380 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 MTND2P14-201ENST00000482139 351 ntBASIC2.13□□□□□ -2.07
RFX3P48380 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RFX3P48380 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.13□□□□□ -2.07
RFX3P48380 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
RFX3P48380 RNU6-64P-201ENST00000517119 105 ntBASIC2.13□□□□□ -2.07
RFX3P48380 AP005902.1-201ENST00000521358 186 ntBASIC2.13□□□□□ -2.07
RFX3P48380 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX3P48380 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.13□□□□□ -2.07
RFX3P48380 MIR4293-201ENST00000584305 78 ntBASIC2.13□□□□□ -2.07
RFX3P48380 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX3P48380 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.13□□□□□ -2.07
RFX3P48380 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX3P48380 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.13□□□□□ -2.07
RFX3P48380 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX3P48380 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX3P48380 AL136313.1-201ENST00000624804 202 ntBASIC2.13□□□□□ -2.07
RFX3P48380 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX3P48380 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RFX3P48380 UBE2L2-201ENST00000254302 429 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL391994.1-201ENST00000254724 282 ntBASIC2.12□□□□□ -2.07
RFX3P48380 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms