Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 BMI1P1-201ENST00000445879 941 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.02□□□□□ -2.09
CXCL12P48061 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.02□□□□□ -2.09
CXCL12P48061 RBM43P1-201ENST00000476891 1081 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC116337.2-201ENST00000477662 156 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC104564.1-201ENST00000493028 407 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.02□□□□□ -2.09
CXCL12P48061 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.02□□□□□ -2.09
CXCL12P48061 SNORA31.11-201ENST00000516528 139 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 SUB1P1-201ENST00000524415 382 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AP004247.1-201ENST00000531556 1289 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.02□□□□□ -2.09
CXCL12P48061 AC023050.2-201ENST00000544968 387 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 TRAV28-201ENST00000557548 323 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AL133153.1-201ENST00000557756 303 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.02□□□□□ -2.09
CXCL12P48061 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 AC103810.1-201ENST00000579873 453 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC021171.1-201ENST00000603137 706 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC025588.2-201ENST00000604851 466 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 snoU13.31-201ENST00000607291 104 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 SDR42E1P2-201ENST00000614861 481 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC034102.8-201ENST00000615146 484 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AP000676.3-201ENST00000623299 569 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC073308.1-201ENST00000623696 305 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 AC110079.1-202ENST00000635213 138 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CXCL12P48061 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CXCL12P48061 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CXCL12P48061 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CXCL12P48061 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.01□□□□□ -2.09
CXCL12P48061 AC007336.1-201ENST00000576365 3828 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CXCL12P48061 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.01□□□□□ -2.09
CXCL12P48061 MIR378A-201ENST00000362177 66 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 RNU4-28P-201ENST00000364739 141 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 RNU6-741P-201ENST00000383889 107 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 MIR19A-201ENST00000384878 82 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 RPS24P7-201ENST00000416921 246 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 AC092047.1-201ENST00000424997 240 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 AL353729.1-201ENST00000425044 720 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.01□□□□□ -2.09
CXCL12P48061 ARPC3P1-201ENST00000437218 533 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 Z82210.1-201ENST00000440037 231 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 MTCO3P45-201ENST00000443036 613 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 MTATP6P30-201ENST00000443540 664 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 AC011753.1-201ENST00000451001 220 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.01□□□□□ -2.09
CXCL12P48061 AC132942.1-201ENST00000486753 483 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.01□□□□□ -2.09
CXCL12P48061 AC110760.3-202ENST00000515177 371 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 RNU6-390P-201ENST00000516259 103 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.01□□□□□ -2.09
CXCL12P48061 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.01□□□□□ -2.09
CXCL12P48061 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.01□□□□□ -2.09
CXCL12P48061 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.01□□□□□ -2.09
CXCL12P48061 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.01□□□□□ -2.09
CXCL12P48061 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.01□□□□□ -2.09
CXCL12P48061 MIR4999-201ENST00000585029 91 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 AC105148.1-201ENST00000604961 409 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 AL136363.1-201ENST00000605349 337 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 MIR7111-201ENST00000619751 72 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 YWHAEP7-203ENST00000622054 312 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 MTND1P37-201ENST00000636562 264 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.01□□□□□ -2.09
CXCL12P48061 CCT4P2-201ENST00000233836 1548 ntBASIC2.01□□□□□ -2.09
CXCL12P48061 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 AL391994.1-201ENST00000254724 282 ntBASIC2□□□□□ -2.09
CXCL12P48061 MIR337-201ENST00000362281 93 ntBASIC2□□□□□ -2.09
CXCL12P48061 RNU6-223P-201ENST00000362830 107 ntBASIC2□□□□□ -2.09
CXCL12P48061 Y_RNA.302-201ENST00000364997 102 ntBASIC2□□□□□ -2.09
CXCL12P48061 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 HMGB1P11-201ENST00000413899 637 ntBASIC2□□□□□ -2.09
CXCL12P48061 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2□□□□□ -2.09
CXCL12P48061 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 RPL7P37-201ENST00000425095 738 ntBASIC2□□□□□ -2.09
CXCL12P48061 AC027124.2-201ENST00000428249 105 ntBASIC2□□□□□ -2.09
CXCL12P48061 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2□□□□□ -2.09
CXCL12P48061 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AL049734.2-201ENST00000441066 616 ntBASIC2□□□□□ -2.09
CXCL12P48061 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2□□□□□ -2.09
CXCL12P48061 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AP1S2P1-201ENST00000457344 379 ntBASIC2□□□□□ -2.09
CXCL12P48061 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AC010631.1-201ENST00000474150 156 ntBASIC2□□□□□ -2.09
CXCL12P48061 AC055855.1-201ENST00000489563 579 ntBASIC2□□□□□ -2.09
CXCL12P48061 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms