Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 Y_RNA.367-201ENST00000365544 101 ntBASIC2.65□□□□□ -1.99
CDX1P47902 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CDX1P47902 RNU6-1042P-201ENST00000384204 107 ntBASIC2.65□□□□□ -1.99
CDX1P47902 RNVU1-14-201ENST00000384770 164 ntBASIC2.65□□□□□ -1.99
CDX1P47902 UBE2V1P2-201ENST00000397758 440 ntBASIC2.65□□□□□ -1.99
CDX1P47902 DEFB108C-201ENST00000400154 252 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AL122016.1-201ENST00000403365 367 ntBASIC2.65□□□□□ -1.99
CDX1P47902 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 AC096649.2-201ENST00000416186 393 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.65□□□□□ -1.99
CDX1P47902 AL365338.1-201ENST00000422282 858 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AL160275.3-201ENST00000423876 471 ntBASIC2.65□□□□□ -1.99
CDX1P47902 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.65□□□□□ -1.99
CDX1P47902 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC022364.2-201ENST00000457963 554 ntBASIC2.65□□□□□ -1.99
CDX1P47902 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.65□□□□□ -1.99
CDX1P47902 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC104806.1-201ENST00000508720 308 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
CDX1P47902 SCARNA20.6-201ENST00000517251 106 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.65□□□□□ -1.99
CDX1P47902 AP002963.1-201ENST00000530590 184 ntBASIC2.65□□□□□ -1.99
CDX1P47902 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDX1P47902 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.65□□□□□ -1.99
CDX1P47902 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX1P47902 AL121821.2-201ENST00000556081 394 ntBASIC2.65□□□□□ -1.99
CDX1P47902 LINC00933-203ENST00000559812 219 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC011471.1-201ENST00000585766 187 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC008521.1-201ENST00000587471 187 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.65□□□□□ -1.99
CDX1P47902 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.65□□□□□ -1.99
CDX1P47902 DEFB131E-202ENST00000602581 683 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC007938.3-201ENST00000604965 623 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AL359198.2-201ENST00000611836 194 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AL589743.7-201ENST00000612637 233 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC107871.2-201ENST00000612894 502 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC100793.4-201ENST00000613683 429 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC009509.4-201ENST00000619202 509 ntBASIC2.65□□□□□ -1.99
CDX1P47902 AC048344.4-201ENST00000619744 527 ntBASIC2.65□□□□□ -1.99
CDX1P47902 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.65□□□□□ -1.99
CDX1P47902 MIR6733-201ENST00000635723 61 ntBASIC2.65□□□□□ -1.99
CDX1P47902 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDX1P47902 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDX1P47902 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDX1P47902 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.65□□□□□ -1.99
CDX1P47902 AC073346.2-201ENST00000624724 2058 ntBASIC2.65□□□□□ -1.99
CDX1P47902 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
CDX1P47902 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDX1P47902 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDX1P47902 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDX1P47902 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
CDX1P47902 SNORA62.1-201ENST00000364287 154 ntBASIC2.64□□□□□ -1.99
CDX1P47902 RNU6-74P-201ENST00000384235 107 ntBASIC2.64□□□□□ -1.99
CDX1P47902 Y_RNA.576-201ENST00000384781 102 ntBASIC2.64□□□□□ -1.99
CDX1P47902 SNORA11.1-201ENST00000408133 129 ntBASIC2.64□□□□□ -1.99
CDX1P47902 RN7SKP220-201ENST00000410611 288 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.64□□□□□ -1.99
CDX1P47902 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.64□□□□□ -1.99
CDX1P47902 CALM2P2-201ENST00000428512 440 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.64□□□□□ -1.99
CDX1P47902 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.64□□□□□ -1.99
CDX1P47902 AL078601.1-201ENST00000444542 271 ntBASIC2.64□□□□□ -1.99
CDX1P47902 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
CDX1P47902 MTND1P29-201ENST00000448112 647 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC132479.1-201ENST00000449160 144 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC003071.1-201ENST00000451219 789 ntBASIC2.64□□□□□ -1.99
CDX1P47902 ELOCP23-201ENST00000452014 332 ntBASIC2.64□□□□□ -1.99
CDX1P47902 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC008155.2-201ENST00000464337 397 ntBASIC2.64□□□□□ -1.99
CDX1P47902 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.64□□□□□ -1.99
CDX1P47902 RPS3AP17-201ENST00000472594 777 ntBASIC2.64□□□□□ -1.99
CDX1P47902 TRBV1-201ENST00000476502 284 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.64□□□□□ -1.99
CDX1P47902 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.64□□□□□ -1.99
CDX1P47902 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.64□□□□□ -1.99
CDX1P47902 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.64□□□□□ -1.99
CDX1P47902 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.64□□□□□ -1.99
CDX1P47902 SUB1P2-201ENST00000556401 297 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.64□□□□□ -1.99
CDX1P47902 AC005261.5-201ENST00000596280 355 ntBASIC2.64□□□□□ -1.99
CDX1P47902 U6.42-201ENST00000618440 107 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC090617.7-201ENST00000623952 126 ntBASIC2.64□□□□□ -1.99
CDX1P47902 AC009161.2-201ENST00000624626 138 ntBASIC2.64□□□□□ -1.99
CDX1P47902 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.64□□□□□ -1.99
CDX1P47902 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
CDX1P47902 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDX1P47902 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CDX1P47902 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CDX1P47902 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CDX1P47902 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDX1P47902 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.63□□□□□ -1.99
CDX1P47902 RNU6-1287P-201ENST00000362914 107 ntBASIC2.63□□□□□ -1.99
CDX1P47902 Y_RNA.333-201ENST00000365274 102 ntBASIC2.63□□□□□ -1.99
CDX1P47902 SNORD115-7-201ENST00000365306 82 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms