Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL451054.2-201ENST00000420896 202 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.66□□□□□ -1.98
BRCC3P46736 AL589823.1-201ENST00000429577 183 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 DLGAP5P1-201ENST00000430307 464 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.66□□□□□ -1.98
BRCC3P46736 Z82210.1-201ENST00000440037 231 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 GAPDHP17-201ENST00000449858 1001 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
BRCC3P46736 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.66□□□□□ -1.98
BRCC3P46736 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.66□□□□□ -1.98
BRCC3P46736 MTND2P24-201ENST00000453434 806 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 RNU6-956P-201ENST00000458868 103 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 RNU7-59P-201ENST00000459101 61 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 RPS29P12-201ENST00000460178 152 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.66□□□□□ -1.98
BRCC3P46736 NDUFB4P2-201ENST00000509515 391 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.66□□□□□ -1.98
BRCC3P46736 RNU6-1220P-201ENST00000517126 108 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 RNU6-840P-201ENST00000517275 65 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.66□□□□□ -1.98
BRCC3P46736 DEFB108A-201ENST00000530110 222 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 HSPE1P20-201ENST00000538133 289 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.66□□□□□ -1.98
BRCC3P46736 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.66□□□□□ -1.98
BRCC3P46736 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.66□□□□□ -1.98
BRCC3P46736 MIR3913-1-201ENST00000577744 102 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 MIR4528-201ENST00000577763 90 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 SNORD53-201ENST00000579969 78 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 BNIP3P8-201ENST00000597863 560 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AL161729.4-201ENST00000604650 476 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 RNU6-87P-201ENST00000607561 108 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AC010678.1-201ENST00000614118 713 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AC008250.2-201ENST00000615261 205 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AC010133.1-201ENST00000615809 842 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
BRCC3P46736 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.66□□□□□ -1.98
BRCC3P46736 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.66□□□□□ -1.98
BRCC3P46736 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.66□□□□□ -1.98
BRCC3P46736 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
BRCC3P46736 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.66□□□□□ -1.98
BRCC3P46736 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.65□□□□□ -1.98
BRCC3P46736 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.65□□□□□ -1.98
BRCC3P46736 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
BRCC3P46736 RNU4-75P-201ENST00000364621 146 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 RNU4-91P-201ENST00000364778 135 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 RNU6-217P-201ENST00000384164 104 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AL139397.2-201ENST00000404529 772 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 RNU2-33P-201ENST00000410344 192 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 RN7SKP140-201ENST00000411196 284 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.65□□□□□ -1.99
BRCC3P46736 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.65□□□□□ -1.99
BRCC3P46736 USP12PX-201ENST00000432383 1057 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AL512844.2-201ENST00000433990 593 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC104850.1-201ENST00000435940 476 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AL714022.1-201ENST00000439897 151 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 ELOCP30-201ENST00000447108 299 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 SNRPGP6-201ENST00000451124 220 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.65□□□□□ -1.99
BRCC3P46736 AL031183.1-201ENST00000457667 207 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.65□□□□□ -1.99
BRCC3P46736 TPT1P7-201ENST00000458300 517 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC092798.1-201ENST00000458542 409 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC008571.1-201ENST00000467232 300 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 RPL23AP45-201ENST00000476406 468 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 RPL23AP41-201ENST00000484754 458 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.65□□□□□ -1.99
BRCC3P46736 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
BRCC3P46736 AC010587.1-201ENST00000505809 469 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.65□□□□□ -1.99
BRCC3P46736 RNU6-826P-201ENST00000516827 104 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 ATP5F1P5-201ENST00000526403 760 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 ARL2BPP2-201ENST00000550907 489 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.65□□□□□ -1.99
BRCC3P46736 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.65□□□□□ -1.99
BRCC3P46736 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.65□□□□□ -1.99
BRCC3P46736 AC103987.3-201ENST00000582071 292 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 NBR2-204ENST00000587322 63 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC040904.1-201ENST00000590850 223 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.65□□□□□ -1.99
BRCC3P46736 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.65□□□□□ -1.99
BRCC3P46736 KC877982.1-201ENST00000602313 470 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AP000787.2-201ENST00000604432 568 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 NUTF2P8-201ENST00000604593 363 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
BRCC3P46736 SDR42E1P2-201ENST00000614861 481 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC006338.1-201ENST00000618453 749 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 MTND1P37-201ENST00000636562 264 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 AC008669.1-201ENST00000565823 2178 ntBASIC2.65□□□□□ -1.99
BRCC3P46736 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
BRCC3P46736 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
BRCC3P46736 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.64□□□□□ -1.99
BRCC3P46736 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
BRCC3P46736 ELF2P3-201ENST00000445099 1506 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
BRCC3P46736 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms