Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.4□□□□□ -1.71
CCNFP41002 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.4□□□□□ -1.71
CCNFP41002 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.4□□□□□ -1.71
CCNFP41002 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNFP41002 MIR4330-201ENST00000579077 105 ntBASIC4.4□□□□□ -1.71
CCNFP41002 PRR13P7-201ENST00000605538 430 ntBASIC4.4□□□□□ -1.71
CCNFP41002 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
CCNFP41002 AL731566.2-201ENST00000618971 317 ntBASIC4.4□□□□□ -1.71
CCNFP41002 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CCNFP41002 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNFP41002 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNFP41002 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCNFP41002 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNFP41002 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNFP41002 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNFP41002 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNFP41002 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNFP41002 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNFP41002 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNFP41002 RPL9P7-201ENST00000330965 580 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RNY1P16-201ENST00000363063 111 ntBASIC4.39□□□□□ -1.71
CCNFP41002 Y_RNA.188-201ENST00000363952 111 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RNU6-1222P-201ENST00000384615 107 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RNU6-1156P-201ENST00000410365 100 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RNU2-71P-201ENST00000411395 189 ntBASIC4.39□□□□□ -1.71
CCNFP41002 AL592148.1-201ENST00000413568 445 ntBASIC4.39□□□□□ -1.71
CCNFP41002 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNFP41002 AL590383.1-201ENST00000428602 75 ntBASIC4.39□□□□□ -1.71
CCNFP41002 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNFP41002 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNFP41002 AL513043.1-201ENST00000439124 535 ntBASIC4.39□□□□□ -1.71
CCNFP41002 CECR9-201ENST00000453421 199 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RNU7-169P-201ENST00000459456 61 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RNU6-1037P-201ENST00000459571 107 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RPL9P9-202ENST00000466501 579 ntBASIC4.39□□□□□ -1.71
CCNFP41002 RNU6-1271P-201ENST00000517049 105 ntBASIC4.39□□□□□ -1.71
CCNFP41002 AC025755.1-201ENST00000521306 278 ntBASIC4.39□□□□□ -1.71
CCNFP41002 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNFP41002 AC006023.2-201ENST00000609916 167 ntBASIC4.39□□□□□ -1.71
CCNFP41002 MIR6810-201ENST00000622701 70 ntBASIC4.39□□□□□ -1.71
CCNFP41002 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNFP41002 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCNFP41002 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
CCNFP41002 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CCNFP41002 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
CCNFP41002 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNFP41002 AC008568.2-201ENST00000623862 2313 ntBASIC4.38□□□□□ -1.71
CCNFP41002 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNFP41002 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNFP41002 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNFP41002 RNU6-384P-201ENST00000364900 104 ntBASIC4.38□□□□□ -1.71
CCNFP41002 RNU6-827P-201ENST00000365553 106 ntBASIC4.38□□□□□ -1.71
CCNFP41002 SNORD14.1-201ENST00000365609 90 ntBASIC4.38□□□□□ -1.71
CCNFP41002 MIR141-201ENST00000384975 95 ntBASIC4.38□□□□□ -1.71
CCNFP41002 MIR10A-201ENST00000385043 110 ntBASIC4.38□□□□□ -1.71
CCNFP41002 Z85995.1-201ENST00000415547 335 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AL096701.2-201ENST00000416920 238 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AC007560.1-201ENST00000426912 237 ntBASIC4.38□□□□□ -1.71
CCNFP41002 FTH1P6-201ENST00000430768 320 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.38□□□□□ -1.71
CCNFP41002 AC133134.1-201ENST00000466800 359 ntBASIC4.38□□□□□ -1.71
CCNFP41002 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNFP41002 RNA5SP291-201ENST00000517222 105 ntBASIC4.38□□□□□ -1.71
CCNFP41002 RN7SKP92-201ENST00000517266 244 ntBASIC4.38□□□□□ -1.71
CCNFP41002 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNFP41002 AC131281.1-201ENST00000522984 164 ntBASIC4.38□□□□□ -1.71
CCNFP41002 OR5D17P-201ENST00000531492 978 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AC004024.1-201ENST00000549244 247 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.38□□□□□ -1.71
CCNFP41002 MIR4697-201ENST00000582977 78 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AC053481.4-201ENST00000583164 216 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AC234771.5-201ENST00000600161 514 ntBASIC4.38□□□□□ -1.71
CCNFP41002 AC100812.1-201ENST00000607622 580 ntBASIC4.38□□□□□ -1.71
CCNFP41002 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNFP41002 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCNFP41002 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNFP41002 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCNFP41002 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.37□□□□□ -1.71
CCNFP41002 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCNFP41002 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNFP41002 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNFP41002 Y_RNA.210-201ENST00000364161 110 ntBASIC4.37□□□□□ -1.71
CCNFP41002 RNU6-398P-201ENST00000384143 109 ntBASIC4.37□□□□□ -1.71
CCNFP41002 Y_RNA.577-201ENST00000384794 101 ntBASIC4.37□□□□□ -1.71
CCNFP41002 MIR129-1-201ENST00000384972 72 ntBASIC4.37□□□□□ -1.71
CCNFP41002 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
CCNFP41002 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCNFP41002 RPS15AP10-201ENST00000432472 382 ntBASIC4.37□□□□□ -1.71
CCNFP41002 AC009220.1-201ENST00000451614 275 ntBASIC4.37□□□□□ -1.71
CCNFP41002 FABP5P15-201ENST00000453566 214 ntBASIC4.37□□□□□ -1.71
CCNFP41002 AC010655.3-201ENST00000478818 450 ntBASIC4.37□□□□□ -1.71
CCNFP41002 AC139453.3-201ENST00000493276 369 ntBASIC4.37□□□□□ -1.71
CCNFP41002 SLC25A15P5-201ENST00000508033 253 ntBASIC4.37□□□□□ -1.71
CCNFP41002 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.37□□□□□ -1.71
CCNFP41002 RNU6-475P-201ENST00000516073 104 ntBASIC4.37□□□□□ -1.71
CCNFP41002 Y_RNA.687-201ENST00000516558 91 ntBASIC4.37□□□□□ -1.71
CCNFP41002 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.37□□□□□ -1.71
CCNFP41002 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNFP41002 MIR3690-201ENST00000580266 75 ntBASIC4.37□□□□□ -1.71
CCNFP41002 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms