Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD12P35452 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 MTND4P12-201ENST00000498999 1377 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXD12P35452 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXD12P35452 AC007823.1-201ENST00000569932 1566 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC004972.1-201ENST00000623934 2209 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD12P35452 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXD12P35452 IPO8P1-201ENST00000455509 3109 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 RNU6-61P-201ENST00000365528 109 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 RNU6-946P-201ENST00000383878 107 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 RNU6-903P-201ENST00000391270 109 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD12P35452 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXD12P35452 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXD12P35452 AC098614.3-201ENST00000438957 440 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 SNRPEP8-201ENST00000442866 260 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXD12P35452 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXD12P35452 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD12P35452 MRPS31P2-201ENST00000451581 518 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AL162395.1-201ENST00000457882 422 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD12P35452 AC108078.2-201ENST00000510750 236 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC046134.1-201ENST00000514454 666 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 LRRC34P2-201ENST00000514850 553 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 RNU6-1282P-201ENST00000516735 96 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD12P35452 SUMO2P20-201ENST00000520803 283 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 OR5B19P-201ENST00000531766 928 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXD12P35452 MIR4298-201ENST00000584380 73 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD12P35452 AC090132.2-201ENST00000615881 347 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC104260.1-201ENST00000616660 539 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 AC011155.2-201ENST00000623202 216 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 ASNSP3-201ENST00000451989 1306 ntBASIC3.59□□□□□ -1.83
HOXD12P35452 UBE3AP2-201ENST00000429033 2259 ntBASIC3.59□□□□□ -1.84
HOXD12P35452 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.59□□□□□ -1.84
HOXD12P35452 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HOXD12P35452 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD12P35452 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD12P35452 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD12P35452 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
HOXD12P35452 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD12P35452 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HOXD12P35452 SNORD115-7-201ENST00000365306 82 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HOXD12P35452 RN7SKP111-201ENST00000410349 271 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 ZNF863P-201ENST00000426746 417 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD12P35452 RPL36AP53-201ENST00000432891 316 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 USP9YP8-201ENST00000441913 500 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD12P35452 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 AC091951.2-201ENST00000500762 203 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AC114781.4-201ENST00000513707 639 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 RNU6-1256P-201ENST00000516539 103 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 RNA5SP291-201ENST00000517222 105 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 NDUFB9P3-201ENST00000521269 501 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AP005435.4-201ENST00000529514 284 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AC011602.1-201ENST00000546484 331 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 TRAV37-201ENST00000553906 342 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AC090877.1-201ENST00000561418 344 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AL138976.2-201ENST00000563989 694 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 MIR4703-201ENST00000577728 79 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 MIR4513-201ENST00000581077 86 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD12P35452 AP003355.3-201ENST00000623465 114 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 API5P2-201ENST00000397055 1498 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD12P35452 OR4G1P-203ENST00000641984 1631 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 MTND5P27-201ENST00000428871 1720 ntBASIC3.58□□□□□ -1.84
HOXD12P35452 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD12P35452 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD12P35452 CBX3P1-201ENST00000325243 554 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 RNU6-552P-201ENST00000362869 119 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 RNU6-799P-201ENST00000363567 107 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 Y_RNA.157-201ENST00000363638 102 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 Y_RNA.576-201ENST00000384781 102 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 RNA5SP252-201ENST00000391131 119 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 RNU6-332P-201ENST00000391193 108 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 RNU2-29P-201ENST00000410423 189 ntBASIC3.57□□□□□ -1.84
HOXD12P35452 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXD12P35452 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXD12P35452 AC012498.1-201ENST00000424037 437 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms