Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RPL17P36-201ENST00000420302 549 ntBASIC4.88□□□□□ -1.63
GPC1P35052 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC1P35052 SEPT7P4-201ENST00000437076 306 ntBASIC4.88□□□□□ -1.63
GPC1P35052 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC1P35052 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC1P35052 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC1P35052 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC1P35052 AC114982.1-201ENST00000469402 321 ntBASIC4.88□□□□□ -1.63
GPC1P35052 Y_RNA.719-201ENST00000517156 106 ntBASIC4.88□□□□□ -1.63
GPC1P35052 AP006245.2-201ENST00000522004 300 ntBASIC4.88□□□□□ -1.63
GPC1P35052 AC024940.3-201ENST00000538551 316 ntBASIC4.88□□□□□ -1.63
GPC1P35052 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.88□□□□□ -1.63
GPC1P35052 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC1P35052 AL390726.5-202ENST00000564800 256 ntBASIC4.88□□□□□ -1.63
GPC1P35052 AC069307.1-201ENST00000602820 447 ntBASIC4.88□□□□□ -1.63
GPC1P35052 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.88□□□□□ -1.63
GPC1P35052 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.88□□□□□ -1.63
GPC1P35052 snoU18.1-201ENST00000629629 71 ntBASIC4.88□□□□□ -1.63
GPC1P35052 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC1P35052 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC1P35052 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GPC1P35052 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
GPC1P35052 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC1P35052 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC1P35052 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC1P35052 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC1P35052 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC1P35052 AL353743.1-202ENST00000431724 1695 ntBASIC4.87□□□□□ -1.63
GPC1P35052 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC1P35052 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC1P35052 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GPC1P35052 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
GPC1P35052 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC1P35052 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC1P35052 Y_RNA.273-201ENST00000364703 102 ntBASIC4.87□□□□□ -1.63
GPC1P35052 RNA5SP132-201ENST00000364725 118 ntBASIC4.87□□□□□ -1.63
GPC1P35052 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC1P35052 EIF1AXP1-201ENST00000419267 435 ntBASIC4.87□□□□□ -1.63
GPC1P35052 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC1P35052 AL512844.2-201ENST00000433990 593 ntBASIC4.87□□□□□ -1.63
GPC1P35052 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC1P35052 TDGF1P1-201ENST00000445734 527 ntBASIC4.87□□□□□ -1.63
GPC1P35052 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC1P35052 RPS20P22-201ENST00000473700 357 ntBASIC4.87□□□□□ -1.63
GPC1P35052 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC1P35052 SCARNA21.2-201ENST00000516600 166 ntBASIC4.87□□□□□ -1.63
GPC1P35052 RNU6-919P-201ENST00000516731 104 ntBASIC4.87□□□□□ -1.63
GPC1P35052 RNA5SP165-201ENST00000517142 115 ntBASIC4.87□□□□□ -1.63
GPC1P35052 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC1P35052 AL391261.3-201ENST00000557194 520 ntBASIC4.87□□□□□ -1.63
GPC1P35052 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC1P35052 MIR4782-201ENST00000577987 79 ntBASIC4.87□□□□□ -1.63
GPC1P35052 MIR3684-201ENST00000579779 74 ntBASIC4.87□□□□□ -1.63
GPC1P35052 AC233702.9-201ENST00000581528 203 ntBASIC4.87□□□□□ -1.63
GPC1P35052 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC1P35052 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GPC1P35052 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC1P35052 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC1P35052 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
GPC1P35052 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.86□□□□□ -1.63
GPC1P35052 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
GPC1P35052 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.86□□□□□ -1.63
GPC1P35052 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
GPC1P35052 Y_RNA.7-201ENST00000362352 102 ntBASIC4.86□□□□□ -1.63
GPC1P35052 Y_RNA.238-201ENST00000364441 102 ntBASIC4.86□□□□□ -1.63
GPC1P35052 Y_RNA.319-201ENST00000365138 92 ntBASIC4.86□□□□□ -1.63
GPC1P35052 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 RNU6-281P-201ENST00000384212 103 ntBASIC4.86□□□□□ -1.63
GPC1P35052 RNU6-72P-201ENST00000384285 79 ntBASIC4.86□□□□□ -1.63
GPC1P35052 MIR10B-201ENST00000385011 110 ntBASIC4.86□□□□□ -1.63
GPC1P35052 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 AL357075.1-201ENST00000404107 726 ntBASIC4.86□□□□□ -1.63
GPC1P35052 AL391361.1-201ENST00000405580 489 ntBASIC4.86□□□□□ -1.63
GPC1P35052 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.86□□□□□ -1.63
GPC1P35052 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC1P35052 RPL31P13-201ENST00000484151 370 ntBASIC4.86□□□□□ -1.63
GPC1P35052 NIP7P2-201ENST00000485801 544 ntBASIC4.86□□□□□ -1.63
GPC1P35052 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.86□□□□□ -1.63
GPC1P35052 AC107016.1-201ENST00000550463 337 ntBASIC4.86□□□□□ -1.63
GPC1P35052 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC1P35052 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.86□□□□□ -1.63
GPC1P35052 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC1P35052 AL133393.1-201ENST00000603277 287 ntBASIC4.86□□□□□ -1.63
GPC1P35052 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.86□□□□□ -1.63
GPC1P35052 MIR6768-201ENST00000610734 72 ntBASIC4.86□□□□□ -1.63
GPC1P35052 AL512624.1-201ENST00000613638 469 ntBASIC4.86□□□□□ -1.63
GPC1P35052 AC099669.2-201ENST00000616549 437 ntBASIC4.86□□□□□ -1.63
GPC1P35052 Y_RNA.778-201ENST00000620203 90 ntBASIC4.86□□□□□ -1.63
GPC1P35052 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.86□□□□□ -1.63
GPC1P35052 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
GPC1P35052 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
GPC1P35052 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.86□□□□□ -1.63
GPC1P35052 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC1P35052 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms