Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HOXC12P31275 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC12P31275 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC12P31275 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC12P31275 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC12P31275 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HOXC12P31275 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HOXC12P31275 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC12P31275 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC12P31275 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC12P31275 RNU6-50P-201ENST00000362356 103 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 Y_RNA.39-201ENST00000362620 98 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 RNU6-140P-201ENST00000384566 108 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 MIR23B-201ENST00000384832 97 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 MIR521-1-201ENST00000384902 87 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 HSPE1P26-201ENST00000405341 275 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 RNA5SP129-201ENST00000410276 118 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC12P31275 AC140479.3-201ENST00000418944 1126 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC12P31275 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC12P31275 AC092573.2-201ENST00000434546 243 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 AL078601.1-201ENST00000444542 271 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC12P31275 snoU109.2-201ENST00000459316 135 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 RNU4-77P-201ENST00000516692 156 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 HSBP1P1-201ENST00000555205 166 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 HSPE1P5-201ENST00000561489 272 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC12P31275 ZNF192P1-203ENST00000565888 810 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 AC023575.1-201ENST00000580510 358 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 AC004852.3-201ENST00000614131 326 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 AL161629.2-201ENST00000615347 275 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC12P31275 U6.99-201ENST00000637524 83 ntBASIC4.11□□□□□ -1.75
HOXC12P31275 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC12P31275 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXC12P31275 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HOXC12P31275 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
HOXC12P31275 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC12P31275 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC12P31275 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC12P31275 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC12P31275 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC12P31275 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC12P31275 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC12P31275 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC12P31275 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC12P31275 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC12P31275 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 Y_RNA.47-201ENST00000362697 108 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 RNY1P16-201ENST00000363063 111 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 Y_RNA.149-201ENST00000363558 117 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 U8.8-201ENST00000365399 135 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 RNA5SP397-201ENST00000391323 118 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AL590762.2-201ENST00000395798 571 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC12P31275 RNU6-101P-201ENST00000410323 104 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 RNU6-1156P-201ENST00000410365 100 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 RNU2-71P-201ENST00000411395 189 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AL160275.2-201ENST00000412010 394 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 DPH3P2-201ENST00000422618 250 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 EIF4HP2-201ENST00000424380 563 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AC087650.1-201ENST00000431445 468 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC12P31275 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC12P31275 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC12P31275 AL353752.1-201ENST00000454946 260 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 U8.21-201ENST00000459536 136 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AC109327.1-201ENST00000471666 403 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 RN7SL604P-201ENST00000492589 296 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AK3P2-201ENST00000507976 429 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC12P31275 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC12P31275 MIR3149-201ENST00000584629 83 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC12P31275 AC006006.1-201ENST00000603082 144 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC12P31275 U3.53-201ENST00000628922 216 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AL606534.2-204ENST00000635008 178 ntBASIC4.1□□□□□ -1.75
HOXC12P31275 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC12P31275 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
HOXC12P31275 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXC12P31275 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXC12P31275 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HOXC12P31275 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC12P31275 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC12P31275 OR56B2P-202ENST00000641377 2453 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 Y_RNA.176-201ENST00000363815 109 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC12P31275 Y_RNA.424-201ENST00000384063 103 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 Y_RNA.577-201ENST00000384794 101 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC12P31275 NUP35P1-201ENST00000422734 947 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 AC092047.1-201ENST00000424997 240 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 RPEP3-201ENST00000425462 676 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXC12P31275 AL162151.2-201ENST00000448875 158 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms