Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU6-678P-201ENST00000516832 109 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 RNU6-928P-201ENST00000516876 104 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.28□□□□□ -2.04
HOXA9P31269 MTATP6P15-201ENST00000527233 835 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXA9P31269 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
HOXA9P31269 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXA9P31269 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXA9P31269 MIR4307-201ENST00000582802 84 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 RPS15AP11-201ENST00000594193 385 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 AP000403.1-201ENST00000603349 851 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXA9P31269 AC090132.2-201ENST00000615881 347 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 AC120349.3-201ENST00000624377 529 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 ZNF72P-201ENST00000425869 1908 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXA9P31269 MTND5P29-201ENST00000458676 1807 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.27□□□□□ -2.05
HOXA9P31269 CCNG1P1-201ENST00000406783 885 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 RNU4-72P-201ENST00000410754 173 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 RNU6-516P-201ENST00000411381 104 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AL359704.1-201ENST00000411586 781 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 MTND1P21-201ENST00000412991 285 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.27□□□□□ -2.05
HOXA9P31269 RPL23AP39-201ENST00000415533 405 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXA9P31269 AC092447.3-201ENST00000426027 686 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.27□□□□□ -2.05
HOXA9P31269 AL714022.1-201ENST00000439897 151 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 GDI2P2-201ENST00000445131 608 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 TPT1P14-201ENST00000448018 505 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC104058.1-201ENST00000448028 297 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AL133217.1-201ENST00000450980 425 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 ART2BP-201ENST00000453501 499 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC116337.2-201ENST00000477662 156 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 RPS3AP22-201ENST00000488297 769 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC098862.1-201ENST00000504991 413 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXA9P31269 RNU6-798P-201ENST00000516912 103 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC068587.4-201ENST00000533893 186 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.27□□□□□ -2.05
HOXA9P31269 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 RPS3AP23-202ENST00000574601 686 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXA9P31269 AP001004.1-201ENST00000582468 324 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC090616.2-202ENST00000584248 222 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC025754.2-201ENST00000606491 432 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXA9P31269 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AC019226.1-201ENST00000625666 515 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 AP003399.1-201ENST00000637534 361 ntBASIC2.27□□□□□ -2.05
HOXA9P31269 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HOXA9P31269 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA9P31269 AC022336.2-201ENST00000568966 2538 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA9P31269 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA9P31269 RNU1-39P-201ENST00000383897 165 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 SNORA67.3-201ENST00000384366 140 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC078974.1-201ENST00000411597 223 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 TPMTP3-201ENST00000411928 735 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA9P31269 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA9P31269 SEPT2P1-201ENST00000419651 180 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC018630.2-202ENST00000422992 927 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 MTND5P25-201ENST00000430499 799 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AL445567.1-201ENST00000439121 144 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 RPS20P22-201ENST00000473700 357 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 MTND4P2-201ENST00000507767 1203 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.26□□□□□ -2.05
HOXA9P31269 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
HOXA9P31269 RNU6-991P-201ENST00000516168 107 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 RNU6-759P-201ENST00000516740 103 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA9P31269 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA9P31269 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA9P31269 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA9P31269 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA9P31269 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA9P31269 AC009127.3-201ENST00000570531 403 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC005951.2-201ENST00000576282 495 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA9P31269 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA9P31269 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA9P31269 AC091965.4-201ENST00000607691 587 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 OR10AB1P-201ENST00000609613 938 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AL355472.4-201ENST00000610233 626 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC004223.4-201ENST00000612426 332 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC005332.10-201ENST00000612725 619 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC091304.6-201ENST00000619761 202 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC009268.2-201ENST00000621925 457 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AL356266.1-201ENST00000623311 483 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC079248.2-201ENST00000623779 326 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 AC112204.3-201ENST00000623822 332 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA9P31269 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA9P31269 AC092125.1-201ENST00000562568 1995 ntBASIC2.26□□□□□ -2.05
HOXA9P31269 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA9P31269 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms