Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL118508.4-201ENST00000624142 1176 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AL359851.1-201ENST00000569460 4997 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A5P29400 MIR216A-201ENST00000385063 110 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC016769.3-201ENST00000396562 315 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC007098.1-201ENST00000420122 367 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.39□□□□□ -2.19
COL4A5P29400 DEFB130D-201ENST00000426866 237 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 Z80107.1-201ENST00000436830 412 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AL049734.2-201ENST00000441066 616 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 RPS20P20-201ENST00000460498 340 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 MRPL42P6-201ENST00000486397 371 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A5P29400 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.39□□□□□ -2.19
COL4A5P29400 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 CYCSP26-201ENST00000534107 320 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.39□□□□□ -2.19
COL4A5P29400 LINC00557-201ENST00000563184 1279 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 MTATP6P25-201ENST00000574491 261 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 AC004987.4-201ENST00000603383 338 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC100814.1-201ENST00000606963 623 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A5P29400 AC021755.4-201ENST00000616620 456 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A5P29400 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
COL4A5P29400 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A5P29400 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 SNORA70.7-201ENST00000384159 133 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 RNU6-549P-201ENST00000384433 107 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 RNU6-1072P-201ENST00000384703 107 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 RNU6-443P-201ENST00000384780 107 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 MIR135A2-201ENST00000384854 100 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 U3.40-201ENST00000408706 208 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 RNU4-27P-201ENST00000410889 139 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 EBAG9P1-201ENST00000418955 543 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 MTND2P5-201ENST00000432656 1006 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.39□□□□□ -2.19
COL4A5P29400 RNU7-26P-201ENST00000458980 63 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC093801.2-201ENST00000503966 1050 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 RNA5SP337-201ENST00000517007 109 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A5P29400 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A5P29400 AC133794.1-201ENST00000602731 914 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.39□□□□□ -2.19
COL4A5P29400 AC079597.1-201ENST00000624306 508 ntBASIC1.39□□□□□ -2.19
COL4A5P29400 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
COL4A5P29400 RNA5SP257-201ENST00000363023 116 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AP002784.2-201ENST00000397300 549 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A5P29400 HMGB1P9-201ENST00000429856 646 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 THAP5P1-201ENST00000439089 262 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.38□□□□□ -2.19
COL4A5P29400 MTCYBP3-201ENST00000445588 1137 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 VN1R10P-201ENST00000447106 875 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A5P29400 HAR1A.1-201ENST00000459583 118 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.38□□□□□ -2.19
COL4A5P29400 AC114801.2-201ENST00000503825 781 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 RNU6-928P-201ENST00000516876 104 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 SNORA76.2-201ENST00000517095 137 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 SCARNA3-201ENST00000517097 143 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A5P29400 AC007151.1-201ENST00000572774 483 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A5P29400 AC024619.4-201ENST00000580924 316 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.38□□□□□ -2.19
COL4A5P29400 7SK.7-201ENST00000603504 247 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 FTX_3.1-201ENST00000610451 147 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AC073308.1-201ENST00000623696 305 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.38□□□□□ -2.19
COL4A5P29400 AL137003.2-201ENST00000606924 2538 ntBASIC1.38□□□□□ -2.19
COL4A5P29400 CCT4P2-201ENST00000233836 1548 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 RNU6-481P-201ENST00000384194 107 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 RNU1-148P-201ENST00000384472 162 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 U3.20-201ENST00000390909 217 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 RPS3AP24-201ENST00000407896 734 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 SEPT2P1-201ENST00000419651 180 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AL691517.1-201ENST00000440833 1235 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 RPL26P6-201ENST00000440913 438 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AC108729.2-201ENST00000476543 840 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL4A5P29400 AC138853.1-201ENST00000503549 823 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 MTCYBP35-201ENST00000503630 1137 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 RNU6-751P-201ENST00000516382 101 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 RNA5SP291-201ENST00000517222 105 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 HSPA8P13-201ENST00000523715 472 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.37□□□□□ -2.19
COL4A5P29400 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.37□□□□□ -2.19
COL4A5P29400 AL022067.1-201ENST00000602426 454 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms