Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC104136.1-201ENST00000512969 394 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.15□□□□□ -1.91
ABCD3P28288 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.15□□□□□ -1.91
ABCD3P28288 NDUFB9P3-201ENST00000521269 501 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.15□□□□□ -1.91
ABCD3P28288 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.15□□□□□ -1.91
ABCD3P28288 AC008752.3-201ENST00000588113 712 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 AL355877.2-201ENST00000603670 358 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 AC024220.1-201ENST00000603675 484 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 AL645944.1-201ENST00000603857 493 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ABCD3P28288 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ABCD3P28288 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.15□□□□□ -1.91
ABCD3P28288 ADAM3A-203ENST00000461344 2157 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 HSPA8P4-201ENST00000511877 1920 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
ABCD3P28288 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
ABCD3P28288 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ABCD3P28288 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ABCD3P28288 RNU6-166P-201ENST00000384371 107 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ABCD3P28288 RNU6-1158P-201ENST00000391167 107 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AL139039.1-201ENST00000401900 692 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AL356057.2-201ENST00000403318 432 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 RNU6-193P-201ENST00000410977 107 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AC023141.4-201ENST00000412031 328 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 Z99755.1-201ENST00000414048 380 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.14□□□□□ -1.91
ABCD3P28288 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.14□□□□□ -1.91
ABCD3P28288 AL358075.3-201ENST00000426289 226 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 TRIAP1P1-201ENST00000427062 225 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 RNU6-261P-201ENST00000459506 102 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AC083798.1-201ENST00000472671 131 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 HMGB1P30-201ENST00000492455 606 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AC092436.1-201ENST00000506450 503 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.14□□□□□ -1.91
ABCD3P28288 AC112206.3-201ENST00000514578 389 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 LRRC34P2-201ENST00000514850 553 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 SNORA40.12-201ENST00000516329 111 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 RN7SKP219-201ENST00000516825 296 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 SNORD19.2-201ENST00000516978 73 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.14□□□□□ -1.91
ABCD3P28288 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.14□□□□□ -1.91
ABCD3P28288 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.14□□□□□ -1.91
ABCD3P28288 AC021739.1-201ENST00000559631 174 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AC037471.2-201ENST00000564941 598 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 CYCSP39-201ENST00000565821 309 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.14□□□□□ -1.91
ABCD3P28288 AL451007.1-201ENST00000595491 289 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AC012314.7-201ENST00000619693 93 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.14□□□□□ -1.91
ABCD3P28288 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
ABCD3P28288 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
ABCD3P28288 MTND4P14-201ENST00000435799 1354 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ABCD3P28288 AC058791.1-201ENST00000608412 3198 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ABCD3P28288 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ABCD3P28288 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 Y_RNA.3-201ENST00000362331 103 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 RNA5SP197-201ENST00000363357 119 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 RNU1-33P-201ENST00000364249 162 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 RNU6-371P-201ENST00000364283 108 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 MIR578-201ENST00000384828 96 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 MIR181A1-201ENST00000385026 110 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ABCD3P28288 RNU6-750P-201ENST00000390946 107 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AC068050.1-201ENST00000394891 380 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AL591416.1-201ENST00000404015 867 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 RNU2-49P-201ENST00000410666 184 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 Y_RNA.623-201ENST00000411128 95 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 ATG3P1-201ENST00000419507 911 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCD3P28288 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.13□□□□□ -1.91
ABCD3P28288 AP000907.1-201ENST00000428428 510 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCD3P28288 AL627311.1-201ENST00000431514 115 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.13□□□□□ -1.91
ABCD3P28288 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCD3P28288 WASF1P1-201ENST00000447560 1131 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCD3P28288 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCD3P28288 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.13□□□□□ -1.91
ABCD3P28288 RPS27P29-201ENST00000463110 252 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 RPS4XP22-201ENST00000480755 780 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AL163973.1-201ENST00000484753 577 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.13□□□□□ -1.91
ABCD3P28288 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
ABCD3P28288 AP005435.4-201ENST00000529514 284 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AC104383.1-201ENST00000530297 370 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 ZNF519P2-201ENST00000557032 169 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 LINC00933-203ENST00000559812 219 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AC234778.2-201ENST00000566241 354 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 MTATP6P3-201ENST00000581686 676 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 AL354950.2-201ENST00000617939 290 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms