Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC109809.1-201ENST00000619665 545 ntBASIC1.38□□□□□ -2.19
HLA-DMBP28068 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DMBP28068 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 AL161781.1-201ENST00000354277 403 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 RNU6-223P-201ENST00000362830 107 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 RNU6-1207P-201ENST00000384343 107 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 RNU6-748P-201ENST00000384648 107 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 RNU6-114P-201ENST00000384704 105 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC096920.1-201ENST00000423991 241 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC010153.1-201ENST00000432862 727 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AL353689.1-201ENST00000438895 199 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 USP9YP15-201ENST00000442391 422 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 CECR9-201ENST00000453421 199 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 RPL18AP17-201ENST00000455326 198 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 PPP1R2P5-201ENST00000457256 603 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC005410.1-202ENST00000460347 485 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 RPL23AP63-201ENST00000498752 471 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 MTND4P2-201ENST00000507767 1203 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC117522.2-201ENST00000510049 657 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 RNU6-334P-201ENST00000517072 102 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 SNRPGP1-201ENST00000553864 222 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC110588.1-201ENST00000559699 137 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DMBP28068 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 ROCK1P1-201ENST00000573767 549 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 MIR5708-201ENST00000579723 85 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC011939.3-201ENST00000613686 466 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AC023158.2-201ENST00000614876 543 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 OR1S1-201ENST00000624470 978 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AL163152.1-201ENST00000642001 374 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DMBP28068 ZNF355P-201ENST00000427301 3216 ntBASIC1.37□□□□□ -2.19
HLA-DMBP28068 AP005901.5-201ENST00000545779 1796 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DMBP28068 RNU6-1122P-201ENST00000384449 107 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 SNORA26.9-201ENST00000391322 122 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 HMGN2P39-201ENST00000398005 273 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 NDUFS5P1-201ENST00000405668 289 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 AC068533.2-201ENST00000411872 306 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 RPS20P15-201ENST00000412792 311 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 BTF3P8-201ENST00000414577 526 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 MTCO2P1-201ENST00000424648 477 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 ADAM3A-203ENST00000461344 2157 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DMBP28068 AC117503.1-201ENST00000472241 394 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 RNU6-237P-201ENST00000515985 71 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 RNU6-1225P-201ENST00000516336 65 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 RNU6-703P-201ENST00000516946 107 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 AC104417.1-201ENST00000523974 751 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 OR6C7P-201ENST00000547875 934 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 MRPS36P5-201ENST00000551909 298 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 AL355598.1-201ENST00000604169 202 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 DUSP12P1-201ENST00000612874 516 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 MIR6845-201ENST00000613182 61 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 AL354696.1-201ENST00000614652 497 ntBASIC1.36□□□□□ -2.19
HLA-DMBP28068 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DMBP28068 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DMBP28068 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMBP28068 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMBP28068 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMBP28068 AL079343.1-201ENST00000572358 1771 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 RNU1-72P-201ENST00000362976 153 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DMBP28068 MIR9-3-201ENST00000385084 90 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 RNU2-63P-201ENST00000410792 194 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 AL161449.1-201ENST00000414531 1199 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMBP28068 USP9YP26-201ENST00000421008 661 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMBP28068 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DMBP28068 MTCO3P45-201ENST00000443036 613 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 MTCYBP42-201ENST00000444653 1130 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DMBP28068 AC020550.1-201ENST00000447385 163 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 snoU109.1-201ENST00000459339 135 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 AP001324.2-201ENST00000461163 319 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMBP28068 AC018437.1-201ENST00000492214 406 ntBASIC1.35□□□□□ -2.19
HLA-DMBP28068 AC104564.1-201ENST00000493028 407 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms