Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR2AP24928 AC009313.2-201ENST00000417893 1941 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR2AP24928 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
POLR2AP24928 AC018529.3-201ENST00000624212 2254 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR2AP24928 AC011155.1-201ENST00000316512 456 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 Y_RNA.202-201ENST00000364083 110 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 SNORD74.4-201ENST00000364129 80 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 SNORA63.7-201ENST00000365579 123 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 Y_RNA.401-201ENST00000383965 117 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 Y_RNA.496-201ENST00000384444 101 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 HSPE1P8-201ENST00000406997 288 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 RNU6-1304P-201ENST00000411374 106 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 MED13P1-201ENST00000428342 171 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR2AP24928 RPL23AP33-201ENST00000442301 452 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 RPS24P13-201ENST00000442520 397 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 AC087879.1-201ENST00000474343 374 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.81□□□□□ -1.8
POLR2AP24928 S100A11P1-201ENST00000477525 312 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 RPS26P15-201ENST00000488067 348 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 AC005912.1-201ENST00000495392 255 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 AC116655.1-201ENST00000508324 901 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 MTCO2P24-201ENST00000515611 426 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR2AP24928 AL121576.1-201ENST00000556055 276 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR2AP24928 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR2AP24928 AC022893.3-201ENST00000607665 437 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 AL391813.2-201ENST00000609113 322 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 AC103710.2-201ENST00000609912 942 ntBASIC3.81□□□□□ -1.8
POLR2AP24928 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR2AP24928 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
POLR2AP24928 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
POLR2AP24928 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
POLR2AP24928 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
POLR2AP24928 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR2AP24928 Y_RNA.373-201ENST00000365600 103 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 MTCYBP4-201ENST00000401524 249 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 RNU6-101P-201ENST00000410323 104 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 RNU6-387P-201ENST00000411331 105 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 MRPS18BP2-201ENST00000434310 759 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 HMGB3P22-202ENST00000451823 572 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC010469.1-201ENST00000463864 576 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.8□□□□□ -1.8
POLR2AP24928 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 AC100870.1-201ENST00000522035 505 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 AL133153.1-201ENST00000557756 303 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 MIR5690-201ENST00000583739 73 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 7SK.7-201ENST00000603504 247 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AL670379.10-201ENST00000604330 253 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 ATP1B3P1-201ENST00000605365 821 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AL670379.9-201ENST00000605428 253 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC087588.2-201ENST00000617667 426 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.8□□□□□ -1.8
POLR2AP24928 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR2AP24928 AC103710.2-202ENST00000641454 2853 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR2AP24928 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
POLR2AP24928 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
POLR2AP24928 SSXP10-201ENST00000402595 565 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 MIR548F5-201ENST00000408421 86 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 OR2AS1P-201ENST00000427827 319 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 RPL36P19-201ENST00000430744 301 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 RPL21P112-201ENST00000434403 463 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC024082.2-201ENST00000434771 238 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR2AP24928 HMGB3P21-201ENST00000452483 547 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC021382.1-201ENST00000483523 359 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR2AP24928 SCARNA24.1-201ENST00000516465 137 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 IGLVIV-53-201ENST00000520107 367 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.8□□□□□ -1.8
POLR2AP24928 MIR3149-201ENST00000584629 83 ntBASIC3.8□□□□□ -1.8
POLR2AP24928 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR2AP24928 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.79□□□□□ -1.8
POLR2AP24928 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR2AP24928 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR2AP24928 MTND5P19-201ENST00000424872 1794 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 AL513302.2-201ENST00000562313 1842 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR2AP24928 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR2AP24928 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR2AP24928 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
POLR2AP24928 Y_RNA.47-201ENST00000362697 108 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 SNORD3E-201ENST00000362899 217 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 RN7SKP44-201ENST00000363602 316 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 RNU6-1284P-201ENST00000363701 100 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 U3.11-201ENST00000364476 212 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms