Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AP000936.2-201ENST00000447151 681 ntBASIC2.4□□□□□ -2.03
SDC1P18827 SNORD109B-201ENST00000458961 67 ntBASIC2.4□□□□□ -2.03
SDC1P18827 SNORD109A-201ENST00000459128 67 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AC010486.3-201ENST00000511602 785 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
SDC1P18827 RNU7-51P-201ENST00000516560 62 ntBASIC2.4□□□□□ -2.03
SDC1P18827 RNU6-1220P-201ENST00000517126 108 ntBASIC2.4□□□□□ -2.03
SDC1P18827 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC1P18827 AC022634.1-201ENST00000520765 532 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.4□□□□□ -2.03
SDC1P18827 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC1P18827 ELOCP29-201ENST00000588193 334 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.4□□□□□ -2.03
SDC1P18827 CLIC4P2-201ENST00000601934 717 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AC104763.2-201ENST00000604179 382 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AP002360.4-201ENST00000606980 481 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AL365204.3-201ENST00000612448 685 ntBASIC2.4□□□□□ -2.03
SDC1P18827 MIR3974-201ENST00000637126 96 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AL365361.1-201ENST00000566942 3481 ntBASIC2.4□□□□□ -2.03
SDC1P18827 CR848007.1-201ENST00000442354 1699 ntBASIC2.4□□□□□ -2.03
SDC1P18827 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SDC1P18827 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SDC1P18827 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.4□□□□□ -2.03
SDC1P18827 RNU1-105P-201ENST00000363470 161 ntBASIC2.39□□□□□ -2.03
SDC1P18827 RNY4P34-201ENST00000364779 95 ntBASIC2.39□□□□□ -2.03
SDC1P18827 Y_RNA.333-201ENST00000365274 102 ntBASIC2.39□□□□□ -2.03
SDC1P18827 RNU6-946P-201ENST00000383878 107 ntBASIC2.39□□□□□ -2.03
SDC1P18827 RNU1-73P-201ENST00000383971 164 ntBASIC2.39□□□□□ -2.03
SDC1P18827 RNY3P9-201ENST00000384727 106 ntBASIC2.39□□□□□ -2.03
SDC1P18827 MIR491-201ENST00000384877 84 ntBASIC2.39□□□□□ -2.03
SDC1P18827 RNA5SP354-201ENST00000391247 136 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AL139039.1-201ENST00000401900 692 ntBASIC2.39□□□□□ -2.03
SDC1P18827 RPS12P24-201ENST00000412619 387 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC1P18827 ELOCP4-201ENST00000420090 333 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC090960.1-201ENST00000421072 306 ntBASIC2.39□□□□□ -2.03
SDC1P18827 BPY2DP-201ENST00000422208 265 ntBASIC2.39□□□□□ -2.03
SDC1P18827 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SDC1P18827 RPS15AP5-201ENST00000436276 388 ntBASIC2.39□□□□□ -2.03
SDC1P18827 MTND4P25-201ENST00000441039 533 ntBASIC2.39□□□□□ -2.03
SDC1P18827 UBBP3-201ENST00000445497 241 ntBASIC2.39□□□□□ -2.03
SDC1P18827 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SDC1P18827 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC1P18827 RNA5SP269-201ENST00000459032 137 ntBASIC2.39□□□□□ -2.03
SDC1P18827 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.39□□□□□ -2.03
SDC1P18827 AC007182.2-201ENST00000489251 402 ntBASIC2.39□□□□□ -2.03
SDC1P18827 RPL39P36-201ENST00000490784 156 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC139453.3-201ENST00000493276 369 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC1P18827 MTND2P38-201ENST00000522536 667 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC022616.3-201ENST00000523940 148 ntBASIC2.39□□□□□ -2.03
SDC1P18827 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SDC1P18827 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.39□□□□□ -2.03
SDC1P18827 AC010546.1-201ENST00000569391 485 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC1P18827 AL590229.1-201ENST00000603497 542 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AL033523.1-201ENST00000605153 153 ntBASIC2.39□□□□□ -2.03
SDC1P18827 OR2AS2P-201ENST00000606902 342 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC073114.1-201ENST00000612027 490 ntBASIC2.39□□□□□ -2.03
SDC1P18827 DUSP12P1-201ENST00000612874 516 ntBASIC2.39□□□□□ -2.03
SDC1P18827 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC130324.3-201ENST00000614165 542 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC108479.2-201ENST00000617314 601 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC007998.5-201ENST00000622938 237 ntBASIC2.39□□□□□ -2.03
SDC1P18827 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
SDC1P18827 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SDC1P18827 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.38□□□□□ -2.03
SDC1P18827 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
SDC1P18827 RNU4-91P-201ENST00000364778 135 ntBASIC2.38□□□□□ -2.03
SDC1P18827 U8.8-201ENST00000365399 135 ntBASIC2.38□□□□□ -2.03
SDC1P18827 RPS3AP36-201ENST00000398190 775 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.38□□□□□ -2.03
SDC1P18827 RNU2-49P-201ENST00000410666 184 ntBASIC2.38□□□□□ -2.03
SDC1P18827 RNU2-52P-201ENST00000410680 190 ntBASIC2.38□□□□□ -2.03
SDC1P18827 RNU6-195P-201ENST00000411352 109 ntBASIC2.38□□□□□ -2.03
SDC1P18827 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SDC1P18827 AC137499.1-201ENST00000427602 88 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC1P18827 MTND2P4-201ENST00000445034 1004 ntBASIC2.38□□□□□ -2.03
SDC1P18827 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC1P18827 AL033528.1-201ENST00000453780 140 ntBASIC2.38□□□□□ -2.03
SDC1P18827 RNU6-953P-201ENST00000459154 107 ntBASIC2.38□□□□□ -2.03
SDC1P18827 SNORD42A-201ENST00000459584 64 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AP000852.1-201ENST00000472460 573 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC1P18827 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC1P18827 RNU1-103P-201ENST00000516502 125 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC1P18827 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.38□□□□□ -2.03
SDC1P18827 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.38□□□□□ -2.03
SDC1P18827 OR5B19P-201ENST00000531766 928 ntBASIC2.38□□□□□ -2.03
SDC1P18827 GTF3AP2-201ENST00000557014 266 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AC074050.1-201ENST00000563247 211 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AC005771.1-201ENST00000585581 349 ntBASIC2.38□□□□□ -2.03
SDC1P18827 UCA1.1-201ENST00000620952 75 ntBASIC2.38□□□□□ -2.03
SDC1P18827 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.38□□□□□ -2.03
SDC1P18827 Z99571.1-201ENST00000636677 394 ntBASIC2.38□□□□□ -2.03
SDC1P18827 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.38□□□□□ -2.03
SDC1P18827 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDC1P18827 ELF2P3-201ENST00000445099 1506 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms