| MUC1 | P15941 | STAU2-225 | ENST00000523558 | 1603 nt | TSL 2 BASIC | 1.99 | □□□□□ -2.09 | | |
| MUC1 | P15941 | APCS-201 | ENST00000255040 | 926 nt | APPRIS P1 TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU4-21P-201 | ENST00000362802 | 126 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-223P-201 | ENST00000362830 | 107 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | Y_RNA.500-201 | ENST00000384466 | 111 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MT-TH-201 | ENST00000387441 | 69 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SNORA26.8-201 | ENST00000391306 | 124 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL021407.1-201 | ENST00000404531 | 386 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC114763.2-201 | ENST00000412593 | 826 nt | TSL 2 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | NPM1P11-201 | ENST00000417106 | 855 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL451054.2-201 | ENST00000420896 | 202 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC00397-201 | ENST00000422074 | 344 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | TMEM167AP1-201 | ENST00000423409 | 219 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | CYCSP46-201 | ENST00000423569 | 204 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC006041.1-201 | ENST00000425322 | 328 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL162414.1-201 | ENST00000426204 | 744 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL356583.2-201 | ENST00000426536 | 280 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPL7L1P10-201 | ENST00000427790 | 463 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SRIP2-201 | ENST00000428470 | 166 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPL22P17-201 | ENST00000438729 | 315 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC093639.1-201 | ENST00000441026 | 473 nt | TSL 2 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC006458.1-201 | ENST00000445093 | 653 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL590664.1-201 | ENST00000448065 | 339 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC092422.1-201 | ENST00000455576 | 584 nt | TSL 4 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | PCAT4-202 | ENST00000514836 | 373 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC106895.1-201 | ENST00000515825 | 548 nt | TSL 4 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-390P-201 | ENST00000516259 | 103 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC109329.2-201 | ENST00000519658 | 482 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC022616.6-201 | ENST00000520479 | 119 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SNHG6-202 | ENST00000520619 | 479 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC107934.1-201 | ENST00000522215 | 217 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | DEFB108A-201 | ENST00000530110 | 222 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC124947.2-202 | ENST00000552735 | 133 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC027176.1-201 | ENST00000560204 | 514 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC026771.1-201 | ENST00000564672 | 415 nt | TSL 2 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR3146-201 | ENST00000580367 | 79 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR3118-1-201 | ENST00000581787 | 76 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR5007-201 | ENST00000583098 | 95 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC01899-202 | ENST00000583756 | 575 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC002115.1-201 | ENST00000589603 | 568 nt | TSL 4 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC099566.1-211 | ENST00000595188 | 737 nt | TSL 5 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ZNF788-206 | ENST00000596883 | 692 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SDR42E1P2-201 | ENST00000614861 | 481 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC078883.4-201 | ENST00000623218 | 367 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR4275-201 | ENST00000636486 | 87 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SENP7-204 | ENST00000394085 | 1483 nt | TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | STX7-202 | ENST00000367941 | 15791 nt | APPRIS P1 TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC069528.2-201 | ENST00000624849 | 1991 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| MUC1 | P15941 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SDAD1P2-201 | ENST00000441308 | 2028 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU5F-7P-201 | ENST00000363696 | 115 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU5A-8P-201 | ENST00000364102 | 114 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-270P-201 | ENST00000364131 | 105 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU5E-5P-201 | ENST00000365379 | 116 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SET-203 | ENST00000372688 | 801 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SNORA67.4-201 | ENST00000384688 | 142 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNA5SP252-201 | ENST00000391131 | 119 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR1290-201 | ENST00000408735 | 78 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | Y_RNA.608-201 | ENST00000410647 | 95 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC002456.1-203 | ENST00000412669 | 449 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC01412-201 | ENST00000413525 | 362 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | Z85995.1-201 | ENST00000415547 | 335 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC009518.2-201 | ENST00000418056 | 731 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL023581.1-201 | ENST00000423500 | 455 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL356867.1-201 | ENST00000429623 | 299 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MED14P1-201 | ENST00000430517 | 648 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL356277.3-201 | ENST00000432484 | 618 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC236972.1-201 | ENST00000433225 | 199 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL139289.1-201 | ENST00000436713 | 731 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MACC1-AS1-201 | ENST00000439285 | 639 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | NFIA-AS1-201 | ENST00000442027 | 384 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | KCNQ5-IT1-201 | ENST00000445310 | 563 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | DPPA3P1-201 | ENST00000448050 | 469 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | PCDH9-AS4-201 | ENST00000456459 | 436 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL390961.3-201 | ENST00000458171 | 485 nt | TSL 5 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC090515.1-201 | ENST00000465295 | 476 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ANKRD7-204 | ENST00000477532 | 744 nt | TSL 5 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPL23AP70-201 | ENST00000483361 | 460 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPL23AP41-201 | ENST00000484754 | 458 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPL30P5-201 | ENST00000494923 | 336 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC112204.1-201 | ENST00000502591 | 103 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC097467.3-213 | ENST00000508191 | 726 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC114797.1-201 | ENST00000514003 | 728 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC010261.1-201 | ENST00000514411 | 457 nt | TSL 5 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6ATAC9P-201 | ENST00000516210 | 116 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AP003181.2-201 | ENST00000528941 | 181 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC02384-208 | ENST00000546086 | 565 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC02311-202 | ENST00000556819 | 477 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC01491-201 | ENST00000558434 | 505 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC066612.2-201 | ENST00000559875 | 695 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC012414.6-201 | ENST00000568241 | 401 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC008088.1-201 | ENST00000580993 | 280 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC002984.1-201 | ENST00000591692 | 448 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | APOOP1-201 | ENST00000604695 | 592 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | HOTAIRM1_2.1-201 | ENST00000616712 | 215 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC092140.2-201 | ENST00000618027 | 521 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC091953.2-201 | ENST00000623979 | 160 nt | BASIC | 1.97 | □□□□□ -2.09 | | |