Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.76□□□□□ -1.97
KRT3P12035 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.76□□□□□ -1.97
KRT3P12035 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.76□□□□□ -1.97
KRT3P12035 AMZ2P1-203ENST00000565833 850 ntBASIC2.76□□□□□ -1.97
KRT3P12035 AC010546.1-201ENST00000569391 485 ntBASIC2.76□□□□□ -1.97
KRT3P12035 MIR3670-2-201ENST00000582974 65 ntBASIC2.76□□□□□ -1.97
KRT3P12035 MIR3670-1-201ENST00000584160 65 ntBASIC2.76□□□□□ -1.97
KRT3P12035 MIR3670-3-201ENST00000584855 65 ntBASIC2.76□□□□□ -1.97
KRT3P12035 AC104763.2-201ENST00000604179 382 ntBASIC2.76□□□□□ -1.97
KRT3P12035 AP000787.2-201ENST00000604432 568 ntBASIC2.76□□□□□ -1.97
KRT3P12035 ATP1B3P1-201ENST00000605365 821 ntBASIC2.76□□□□□ -1.97
KRT3P12035 FTX_3.1-201ENST00000610451 147 ntBASIC2.76□□□□□ -1.97
KRT3P12035 MIR3670-4-201ENST00000612260 65 ntBASIC2.76□□□□□ -1.97
KRT3P12035 AC034102.8-201ENST00000615146 484 ntBASIC2.76□□□□□ -1.97
KRT3P12035 AP001506.1-201ENST00000615444 211 ntBASIC2.76□□□□□ -1.97
KRT3P12035 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.76□□□□□ -1.97
KRT3P12035 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.76□□□□□ -1.97
KRT3P12035 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.76□□□□□ -1.97
KRT3P12035 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRT3P12035 RNU1-105P-201ENST00000363470 161 ntBASIC2.75□□□□□ -1.97
KRT3P12035 RNU6-7-201ENST00000364784 107 ntBASIC2.75□□□□□ -1.97
KRT3P12035 RNU1-100P-201ENST00000365255 165 ntBASIC2.75□□□□□ -1.97
KRT3P12035 RNU6-8-201ENST00000365467 107 ntBASIC2.75□□□□□ -1.97
KRT3P12035 SMIM11P1-201ENST00000369586 178 ntBASIC2.75□□□□□ -1.97
KRT3P12035 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRT3P12035 RNU6-217P-201ENST00000384164 104 ntBASIC2.75□□□□□ -1.97
KRT3P12035 RNA5SP210-201ENST00000391034 120 ntBASIC2.75□□□□□ -1.97
KRT3P12035 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT3P12035 USP9YP20-201ENST00000419224 558 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.75□□□□□ -1.97
KRT3P12035 AL592045.1-201ENST00000429867 352 ntBASIC2.75□□□□□ -1.97
KRT3P12035 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT3P12035 RPL31P35-201ENST00000431058 377 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.75□□□□□ -1.97
KRT3P12035 SNRPEP9-201ENST00000436794 238 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC073614.1-201ENST00000438690 650 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.75□□□□□ -1.97
KRT3P12035 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.75□□□□□ -1.97
KRT3P12035 RPS15AP34-201ENST00000487776 387 ntBASIC2.75□□□□□ -1.97
KRT3P12035 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT3P12035 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT3P12035 RPPH1-2P-201ENST00000516688 293 ntBASIC2.75□□□□□ -1.97
KRT3P12035 RN7SKP40-201ENST00000517211 242 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.75□□□□□ -1.97
KRT3P12035 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT3P12035 GTF3AP2-201ENST00000557014 266 ntBASIC2.75□□□□□ -1.97
KRT3P12035 LARP7P3-201ENST00000579888 337 ntBASIC2.75□□□□□ -1.97
KRT3P12035 HMGN2P15-201ENST00000585707 270 ntBASIC2.75□□□□□ -1.97
KRT3P12035 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.75□□□□□ -1.97
KRT3P12035 AC110760.3-201ENST00000598794 467 ntBASIC2.75□□□□□ -1.97
KRT3P12035 BNIP3P9-201ENST00000603714 553 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AL161798.1-201ENST00000604630 131 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AL033523.1-201ENST00000605153 153 ntBASIC2.75□□□□□ -1.97
KRT3P12035 MIR98-201ENST00000606724 119 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC008498.1-201ENST00000613012 531 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC025594.3-201ENST00000613068 790 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC004852.3-201ENST00000614131 326 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC130324.3-201ENST00000614165 542 ntBASIC2.75□□□□□ -1.97
KRT3P12035 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
KRT3P12035 AC006386.2-201ENST00000624491 75 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC012005.1-201ENST00000624575 75 ntBASIC2.75□□□□□ -1.97
KRT3P12035 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.75□□□□□ -1.97
KRT3P12035 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.75□□□□□ -1.97
KRT3P12035 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.75□□□□□ -1.97
KRT3P12035 AC008669.1-201ENST00000565823 2178 ntBASIC2.75□□□□□ -1.97
KRT3P12035 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
KRT3P12035 TEX21P-201ENST00000447107 1476 ntBASIC2.75□□□□□ -1.97
KRT3P12035 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.75□□□□□ -1.97
KRT3P12035 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
KRT3P12035 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KRT3P12035 RNU6-297P-201ENST00000384636 107 ntBASIC2.74□□□□□ -1.97
KRT3P12035 MIR767-201ENST00000390228 109 ntBASIC2.74□□□□□ -1.97
KRT3P12035 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
KRT3P12035 AL139397.2-201ENST00000404529 772 ntBASIC2.74□□□□□ -1.97
KRT3P12035 RNU2-68P-201ENST00000410878 191 ntBASIC2.74□□□□□ -1.97
KRT3P12035 Z92545.1-201ENST00000411782 234 ntBASIC2.74□□□□□ -1.97
KRT3P12035 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRT3P12035 RPLP0P7-201ENST00000416050 667 ntBASIC2.74□□□□□ -1.97
KRT3P12035 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT3P12035 AL365496.1-201ENST00000426885 215 ntBASIC2.74□□□□□ -1.97
KRT3P12035 ELOCP14-201ENST00000428070 331 ntBASIC2.74□□□□□ -1.97
KRT3P12035 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT3P12035 ELOCP7-201ENST00000439968 331 ntBASIC2.74□□□□□ -1.97
KRT3P12035 AC025750.2-201ENST00000442609 450 ntBASIC2.74□□□□□ -1.97
KRT3P12035 GAPDHP17-201ENST00000449858 1001 ntBASIC2.74□□□□□ -1.97
KRT3P12035 AP000705.1-201ENST00000454567 350 ntBASIC2.74□□□□□ -1.97
KRT3P12035 RPL26P9-201ENST00000457466 433 ntBASIC2.74□□□□□ -1.97
KRT3P12035 RPL31P3-201ENST00000458430 332 ntBASIC2.74□□□□□ -1.97
KRT3P12035 AC087588.1-201ENST00000462203 316 ntBASIC2.74□□□□□ -1.97
KRT3P12035 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT3P12035 AC105252.1-201ENST00000503089 286 ntBASIC2.74□□□□□ -1.97
KRT3P12035 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT3P12035 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT3P12035 Vault.3-201ENST00000516676 95 ntBASIC2.74□□□□□ -1.97
KRT3P12035 RNU6-1220P-201ENST00000517126 108 ntBASIC2.74□□□□□ -1.97
KRT3P12035 AL356057.1-201ENST00000533798 831 ntBASIC2.74□□□□□ -1.97
KRT3P12035 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRT3P12035 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRT3P12035 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT3P12035 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms