Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 U3.44-201ENST00000458938 192 ntBASIC4.3□□□□□ -1.72
CHGBP05060 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.3□□□□□ -1.72
CHGBP05060 DYNLL1P5-201ENST00000467158 270 ntBASIC4.3□□□□□ -1.72
CHGBP05060 HMGB1P25-201ENST00000468402 607 ntBASIC4.3□□□□□ -1.72
CHGBP05060 RPS27AP1-201ENST00000475545 471 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AC008526.1-201ENST00000509149 338 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AC026801.2-201ENST00000515352 425 ntBASIC4.3□□□□□ -1.72
CHGBP05060 Y_RNA.661-201ENST00000516003 99 ntBASIC4.3□□□□□ -1.72
CHGBP05060 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.3□□□□□ -1.72
CHGBP05060 AP006245.1-201ENST00000522549 120 ntBASIC4.3□□□□□ -1.72
CHGBP05060 COX6CP5-201ENST00000527162 228 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AL121576.1-201ENST00000556055 276 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.3□□□□□ -1.72
CHGBP05060 AC023043.2-201ENST00000589678 1026 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.3□□□□□ -1.72
CHGBP05060 AL138889.2-201ENST00000603883 242 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AC007938.3-201ENST00000604965 623 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AL034351.1-201ENST00000605288 668 ntBASIC4.3□□□□□ -1.72
CHGBP05060 HMGN2P28-201ENST00000606102 262 ntBASIC4.3□□□□□ -1.72
CHGBP05060 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.3□□□□□ -1.72
CHGBP05060 AC133104.2-201ENST00000615272 193 ntBASIC4.3□□□□□ -1.72
CHGBP05060 AC103705.1-201ENST00000619013 241 ntBASIC4.3□□□□□ -1.72
CHGBP05060 ZNF519P1-201ENST00000449011 1626 ntBASIC4.3□□□□□ -1.72
CHGBP05060 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.3□□□□□ -1.72
CHGBP05060 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHGBP05060 RNU6-1284P-201ENST00000363701 100 ntBASIC4.29□□□□□ -1.72
CHGBP05060 NDUFS5P1-201ENST00000405668 289 ntBASIC4.29□□□□□ -1.72
CHGBP05060 RN7SKP53-201ENST00000411337 315 ntBASIC4.29□□□□□ -1.72
CHGBP05060 RPS12P24-201ENST00000412619 387 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.29□□□□□ -1.72
CHGBP05060 AC099677.1-201ENST00000420575 175 ntBASIC4.29□□□□□ -1.72
CHGBP05060 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.29□□□□□ -1.72
CHGBP05060 MTCYBP10-201ENST00000424905 650 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL358176.2-201ENST00000425769 204 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.29□□□□□ -1.72
CHGBP05060 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.29□□□□□ -1.72
CHGBP05060 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.29□□□□□ -1.72
CHGBP05060 AL358232.1-201ENST00000448030 501 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL162389.1-201ENST00000449233 177 ntBASIC4.29□□□□□ -1.72
CHGBP05060 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.29□□□□□ -1.72
CHGBP05060 ELOCP24-201ENST00000456370 334 ntBASIC4.29□□□□□ -1.72
CHGBP05060 MTATP8P1-201ENST00000467115 207 ntBASIC4.29□□□□□ -1.72
CHGBP05060 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.29□□□□□ -1.72
CHGBP05060 RN7SKP18-201ENST00000516005 275 ntBASIC4.29□□□□□ -1.72
CHGBP05060 RNU6-1332P-201ENST00000516666 104 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.29□□□□□ -1.72
CHGBP05060 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.29□□□□□ -1.72
CHGBP05060 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.29□□□□□ -1.72
CHGBP05060 AC006006.1-201ENST00000603082 144 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL670379.6-201ENST00000603753 252 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL670379.1-201ENST00000604752 252 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL670379.5-201ENST00000605253 252 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL670379.8-201ENST00000605353 252 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AL670379.7-201ENST00000605823 252 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AC090425.1-201ENST00000610007 140 ntBASIC4.29□□□□□ -1.72
CHGBP05060 U2.17-201ENST00000611454 95 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AC083806.3-201ENST00000614016 455 ntBASIC4.29□□□□□ -1.72
CHGBP05060 AC092608.2-201ENST00000624427 218 ntBASIC4.29□□□□□ -1.72
CHGBP05060 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.29□□□□□ -1.72
CHGBP05060 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHGBP05060 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHGBP05060 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHGBP05060 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CHGBP05060 DDX10P1-201ENST00000448545 1933 ntBASIC4.29□□□□□ -1.72
CHGBP05060 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHGBP05060 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.28□□□□□ -1.72
CHGBP05060 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHGBP05060 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHGBP05060 RNA5SP119-201ENST00000362715 117 ntBASIC4.28□□□□□ -1.72
CHGBP05060 RNU6-562P-201ENST00000362731 107 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AL391417.1-201ENST00000404100 426 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AL139397.2-201ENST00000404529 772 ntBASIC4.28□□□□□ -1.72
CHGBP05060 MIR1250-201ENST00000408098 113 ntBASIC4.28□□□□□ -1.72
CHGBP05060 RNU6-387P-201ENST00000411331 105 ntBASIC4.28□□□□□ -1.72
CHGBP05060 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.28□□□□□ -1.72
CHGBP05060 RPS29P4-201ENST00000414733 161 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.28□□□□□ -1.72
CHGBP05060 CALM2P2-201ENST00000428512 440 ntBASIC4.28□□□□□ -1.72
CHGBP05060 CYCSP4-201ENST00000429682 331 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.28□□□□□ -1.72
CHGBP05060 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.28□□□□□ -1.72
CHGBP05060 AC073063.1-201ENST00000434352 607 ntBASIC4.28□□□□□ -1.72
CHGBP05060 RPL21P23-201ENST00000446654 460 ntBASIC4.28□□□□□ -1.72
CHGBP05060 GAPDHP27-201ENST00000447427 1020 ntBASIC4.28□□□□□ -1.72
CHGBP05060 HMGB3P30-201ENST00000457863 606 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AC034236.1-201ENST00000469891 373 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AP001086.1-201ENST00000494882 321 ntBASIC4.28□□□□□ -1.72
CHGBP05060 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.28□□□□□ -1.72
CHGBP05060 AC103783.1-201ENST00000520506 373 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.28□□□□□ -1.72
CHGBP05060 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.28□□□□□ -1.72
CHGBP05060 AL355812.1-201ENST00000603215 216 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AL138726.1-201ENST00000614873 333 ntBASIC4.28□□□□□ -1.72
CHGBP05060 ATP5A1P2-202ENST00000616464 443 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AC010378.1-201ENST00000619270 362 ntBASIC4.28□□□□□ -1.72
CHGBP05060 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.28□□□□□ -1.72
CHGBP05060 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHGBP05060 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.28□□□□□ -1.72
CHGBP05060 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms