Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RN7SKP61-201ENST00000410642 295 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 TOMM22P2-201ENST00000430735 237 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 AL031663.1-201ENST00000437445 219 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 AC004383.1-201ENST00000438135 289 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.61□□□□□ -2.31
SPTA1P02549 Z77249.1-201ENST00000444622 1175 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.61□□□□□ -2.31
SPTA1P02549 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SPTA1P02549 OR5AL2P-201ENST00000532185 920 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 MIR4802-201ENST00000581881 80 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.61□□□□□ -2.31
SPTA1P02549 AL161629.2-201ENST00000615347 275 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 RMST_5.1-201ENST00000618704 126 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.61□□□□□ -2.31
SPTA1P02549 AC087359.1-201ENST00000508335 1740 ntBASIC0.61□□□□□ -2.31
SPTA1P02549 Y_RNA.62-201ENST00000362840 99 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC008676.3-201ENST00000521237 435 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.6□□□□□ -2.31
SPTA1P02549 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.6□□□□□ -2.31
SPTA1P02549 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.6□□□□□ -2.31
SPTA1P02549 AC092470.1-201ENST00000546187 132 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.6□□□□□ -2.31
SPTA1P02549 AC008751.2-201ENST00000597885 980 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC092474.3-201ENST00000603022 568 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC108676.2-201ENST00000605225 163 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AL356585.4-201ENST00000623078 1229 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.6□□□□□ -2.31
SPTA1P02549 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SPTA1P02549 MTCO1P23-201ENST00000415223 1526 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC008555.8-201ENST00000623602 2168 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 Y_RNA.488-201ENST00000384403 102 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 RNU6-19P-201ENST00000384718 107 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 RN7SKP158-201ENST00000410453 326 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 MTATP6P7-201ENST00000453315 681 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC107626.1-201ENST00000471084 183 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SPTA1P02549 Y_RNA.700-201ENST00000516806 100 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.6□□□□□ -2.31
SPTA1P02549 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 LINC00557-201ENST00000563184 1279 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.6□□□□□ -2.31
SPTA1P02549 HSPE1P7-201ENST00000604681 321 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC021646.1-201ENST00000605469 484 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC004908.2-201ENST00000609090 574 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 AC007785.2-201ENST00000598627 1916 ntBASIC0.6□□□□□ -2.31
SPTA1P02549 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
SPTA1P02549 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 RNA5SP276-201ENST00000362580 94 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 AL513475.1-201ENST00000406602 315 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 AC083875.1-201ENST00000419509 405 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 SEPT2P1-201ENST00000419651 180 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SPTA1P02549 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.59□□□□□ -2.31
SPTA1P02549 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.59□□□□□ -2.31
SPTA1P02549 SNORA31.13-201ENST00000516624 135 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.59□□□□□ -2.31
SPTA1P02549 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.59□□□□□ -2.31
SPTA1P02549 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SPTA1P02549 ELOCP5-201ENST00000604924 333 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 AC068880.5-201ENST00000624331 290 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 AP000776.1-201ENST00000530032 1663 ntBASIC0.59□□□□□ -2.31
SPTA1P02549 RNU6-1181P-201ENST00000384191 106 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 RPL21P24-201ENST00000413752 448 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.59□□□□□ -2.32
SPTA1P02549 RPL30P13-201ENST00000418873 348 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.59□□□□□ -2.32
SPTA1P02549 CABYRP1-201ENST00000465493 1045 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.59□□□□□ -2.32
SPTA1P02549 AC103851.1-201ENST00000506833 274 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 NDUFB4P2-201ENST00000509515 391 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.59□□□□□ -2.32
SPTA1P02549 AC009974.1-201ENST00000608881 455 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 AC068787.1-201ENST00000623908 691 ntBASIC0.59□□□□□ -2.32
SPTA1P02549 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SPTA1P02549 AP002784.2-201ENST00000397300 549 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AL136372.1-201ENST00000403060 228 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AL606489.2-201ENST00000433886 234 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 ELOCP11-201ENST00000436690 332 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 ELOCP16-201ENST00000444494 332 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 SUMO2P2-201ENST00000456482 255 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AC055731.1-201ENST00000474387 401 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AC104108.1-201ENST00000509930 412 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.58□□□□□ -2.32
SPTA1P02549 AC016065.2-201ENST00000514530 444 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.58□□□□□ -2.32
SPTA1P02549 DUXAP10-204ENST00000612052 616 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AC003001.2-201ENST00000616294 831 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AL356473.1-201ENST00000406203 1408 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
SPTA1P02549 RNU6-821P-201ENST00000390995 107 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 SNORD65-201ENST00000391079 73 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AL109913.1-201ENST00000421173 514 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.58□□□□□ -2.32
SPTA1P02549 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.58□□□□□ -2.32
SPTA1P02549 AC006548.1-201ENST00000427470 102 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AL591043.1-201ENST00000432461 424 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.58□□□□□ -2.32
SPTA1P02549 BX248409.1-201ENST00000455497 255 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms