Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC009159.2-201ENST00000617603 606 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 U4.3-201ENST00000621047 82 ntBASIC1.83□□□□□ -2.12
HLA-DQA1P01909 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DQA1P01909 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 MIR21-201ENST00000362134 72 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 RN7SKP226-201ENST00000364912 300 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 Y_RNA.560-201ENST00000384689 102 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 Y_RNA.608-201ENST00000410647 95 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 RPL26P27-201ENST00000414397 437 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 MTND1P23-201ENST00000416931 372 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC105272.1-201ENST00000438604 198 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 HMGB3P12-201ENST00000438745 556 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AL445687.1-201ENST00000439946 251 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AL135938.1-201ENST00000443141 297 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 HMGN2P10-201ENST00000448085 265 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 SNORD97-201ENST00000459187 142 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 RPS3AP14-201ENST00000483907 780 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 RNU6-759P-201ENST00000516740 103 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 NACAP3-201ENST00000552100 481 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 ROCK1P1-201ENST00000573767 549 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC090616.2-202ENST00000584248 222 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 WISP1-OT1-201ENST00000602893 642 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 BNIP3P9-201ENST00000603714 553 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC104763.2-201ENST00000604179 382 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC087683.2-201ENST00000611384 326 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 MIR7106-201ENST00000612419 65 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AL589743.7-201ENST00000612637 233 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC007998.5-201ENST00000622938 237 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC008993.2-201ENST00000631744 806 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 MIR3199-2-201ENST00000636243 86 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 AC004520.1-201ENST00000608362 1413 ntBASIC1.82□□□□□ -2.12
HLA-DQA1P01909 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQA1P01909 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 SNORA4.3-201ENST00000365564 137 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 RNU4-52P-201ENST00000384209 138 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 SNORA51.11-201ENST00000384442 131 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 U3.26-201ENST00000391236 204 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 RNU6-920P-201ENST00000410926 92 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC092809.3-201ENST00000415453 231 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 HMGB1P9-201ENST00000429856 646 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 OSTCP8-201ENST00000445117 448 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 KATNBL1P6-201ENST00000453433 915 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC233279.1-201ENST00000455300 423 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 S100A11P2-201ENST00000467589 312 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AP000797.1-201ENST00000478870 387 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC104435.1-201ENST00000483483 166 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 RN7SL432P-201ENST00000484057 298 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC011825.1-201ENST00000484967 388 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC005178.1-201ENST00000508392 440 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 HIGD1AP13-201ENST00000509878 289 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 RNU5F-8P-201ENST00000515941 111 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 RNU6-1092P-201ENST00000516955 87 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 SCARNA11.3-201ENST00000517276 130 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AP003122.4-201ENST00000530980 758 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms