Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 TOMM20P2-201ENST00000540082 421 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 TRAV37-201ENST00000553906 342 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC026464.5-201ENST00000562497 722 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 MTND4LP5-201ENST00000605152 292 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC002044.1-201ENST00000606707 158 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC022306.2-201ENST00000617563 647 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 MIR6810-201ENST00000622701 70 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC022418.1-201ENST00000624118 445 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 AC007256.1-201ENST00000392253 2765 ntBASIC3.18□□□□□ -1.9
HLA-DQA2P01906 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA2P01906 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RNU6-884P-201ENST00000363889 107 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RNU6-82P-201ENST00000363970 107 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RN7SKP227-201ENST00000364445 330 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RNU6-395P-201ENST00000365662 106 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 Y_RNA.399-201ENST00000383955 105 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AL078595.1-201ENST00000404458 226 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 U3.39-201ENST00000408569 239 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 PDCL2P1-201ENST00000419302 352 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RPL17P36-201ENST00000420302 549 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AL159169.1-201ENST00000421119 127 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 IFNA20P-201ENST00000436840 528 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AL583843.1-201ENST00000456070 346 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 snoU13.28-201ENST00000459235 104 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AP000852.1-201ENST00000472460 573 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC084357.1-201ENST00000473404 255 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RPS29P20-201ENST00000489592 171 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 UBE2CP3-201ENST00000502715 450 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC114781.4-201ENST00000513707 639 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 SNORA70.14-201ENST00000516205 110 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RNU6-572P-201ENST00000516724 80 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC090136.1-201ENST00000520009 240 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC090115.3-201ENST00000553218 849 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 SCOCP1-201ENST00000554676 349 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 TGIF1P1-201ENST00000558095 802 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 RN7SL703P-201ENST00000578485 302 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC103705.1-201ENST00000619013 241 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AL031601.2-202ENST00000622650 282 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AP003355.3-201ENST00000623465 114 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 U6.99-201ENST00000637524 83 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 OTUD4P1-201ENST00000237841 3067 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA2P01906 AC068647.1-201ENST00000489539 2265 ntBASIC3.17□□□□□ -1.9
HLA-DQA2P01906 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 RPL21P17-201ENST00000397467 475 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AL445189.1-201ENST00000405722 338 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AL592148.1-201ENST00000413568 445 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 HSPE1P1-201ENST00000421494 318 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 PGBD4P6-201ENST00000421501 610 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 SNRPEP4-201ENST00000435815 279 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AL590664.1-201ENST00000448065 339 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AC117503.1-201ENST00000472241 394 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 RPL30P14-201ENST00000482744 348 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AC008716.1-201ENST00000511084 513 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 RNU1-103P-201ENST00000516502 125 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 RNU7-30P-201ENST00000516835 62 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 RNU6-579P-201ENST00000516879 102 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 SNORA31.19-201ENST00000517079 126 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 HMGB1P14-201ENST00000557424 591 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 H3F3AP1-201ENST00000559984 334 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 MIR4425-201ENST00000580572 84 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 MIR3942-201ENST00000585264 109 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AC007938.3-201ENST00000604965 623 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AC103710.3-201ENST00000608157 948 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 302.3 ms