Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC090132.2-201ENST00000615881 347 ntBASIC2.17□□□□□ -2.06
CTDNEP1O95476 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.17□□□□□ -2.06
CTDNEP1O95476 AL603758.1-201ENST00000618654 241 ntBASIC2.17□□□□□ -2.06
CTDNEP1O95476 PCMTD1P7-201ENST00000634506 357 ntBASIC2.17□□□□□ -2.06
CTDNEP1O95476 AC009902.3-201ENST00000606235 2172 ntBASIC2.17□□□□□ -2.06
CTDNEP1O95476 MTND5P29-201ENST00000458676 1807 ntBASIC2.17□□□□□ -2.06
CTDNEP1O95476 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.17□□□□□ -2.06
CTDNEP1O95476 Y_RNA.18-201ENST00000362461 102 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 RNU6-1078P-201ENST00000364522 103 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 RNU6-253P-201ENST00000384730 105 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 U3.20-201ENST00000390909 217 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 MIR1305-201ENST00000408300 86 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 CCDC58P2-201ENST00000417131 366 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AL590383.1-201ENST00000428602 75 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CTDNEP1O95476 AL356867.1-201ENST00000429623 299 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 GDI2P2-201ENST00000445131 608 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 TPT1P14-201ENST00000448018 505 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 RPS15AP27-201ENST00000449183 343 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC072039.1-201ENST00000477611 581 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC068587.2-201ENST00000478386 781 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 TRBV12-1-201ENST00000479785 344 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 RPS3AP22-201ENST00000488297 769 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC090096.1-201ENST00000489168 390 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC010486.1-201ENST00000511793 424 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CTDNEP1O95476 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CTDNEP1O95476 GLYCAM1-201ENST00000546596 285 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC135628.1-201ENST00000568867 534 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC002400.1-201ENST00000569310 726 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC060771.1-201ENST00000582031 164 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 MIR4307-201ENST00000582802 84 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC005498.1-201ENST00000592125 465 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AP000403.1-201ENST00000603349 851 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AL356280.1-201ENST00000603614 379 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC009318.2-201ENST00000610917 651 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC004223.4-201ENST00000612426 332 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 AC073308.1-201ENST00000623696 305 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 OR5H6-203ENST00000642105 978 ntBASIC2.16□□□□□ -2.06
CTDNEP1O95476 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CTDNEP1O95476 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
CTDNEP1O95476 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.15□□□□□ -2.06
CTDNEP1O95476 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 SNORA68.1-201ENST00000364537 132 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 RNU1-39P-201ENST00000383897 165 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 RNU6-637P-201ENST00000384050 107 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL359704.1-201ENST00000411586 781 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC078974.1-201ENST00000411597 223 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 HMGN2P19-201ENST00000425149 265 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC092447.3-201ENST00000426027 686 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 TAAR7P-201ENST00000436141 242 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL445567.1-201ENST00000439121 144 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 MTND1P26-201ENST00000440488 538 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 USP9YP15-201ENST00000442391 422 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 EPS15P1-201ENST00000448836 336 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL133217.1-201ENST00000450980 425 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC233279.1-201ENST00000455300 423 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL139109.1-201ENST00000455491 297 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC034222.1-201ENST00000494052 532 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CTDNEP1O95476 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 RNU6-1282P-201ENST00000516735 96 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC110588.1-201ENST00000559699 137 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC090616.2-202ENST00000584248 222 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL391813.2-201ENST00000609113 322 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AL355472.4-201ENST00000610233 626 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 AC019226.2-201ENST00000625973 424 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 MIR203B-201ENST00000636080 86 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 MTCO1P9-201ENST00000505577 1534 ntBASIC2.15□□□□□ -2.07
CTDNEP1O95476 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CTDNEP1O95476 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms