Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC091057.3-201ENST00000602684 733 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AC090186.1-201ENST00000605991 572 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AC093673.2-201ENST00000609674 331 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.88□□□□□ -2.11
VAPBO95292 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAPBO95292 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAPBO95292 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VAPBO95292 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
VAPBO95292 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VAPBO95292 RNU6-289P-201ENST00000364093 107 ntBASIC1.87□□□□□ -2.11
VAPBO95292 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
VAPBO95292 AL021407.1-201ENST00000404531 386 ntBASIC1.87□□□□□ -2.11
VAPBO95292 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.87□□□□□ -2.11
VAPBO95292 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPBO95292 AIMP1P2-201ENST00000425294 312 ntBASIC1.87□□□□□ -2.11
VAPBO95292 RPL7P12-201ENST00000446719 750 ntBASIC1.87□□□□□ -2.11
VAPBO95292 FABP5P13-201ENST00000452144 328 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPBO95292 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPBO95292 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPBO95292 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPBO95292 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPBO95292 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPBO95292 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
VAPBO95292 AP003168.1-201ENST00000530091 307 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPBO95292 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPBO95292 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPBO95292 AC098826.3-201ENST00000603823 466 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AL161798.1-201ENST00000604630 131 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AL355297.2-201ENST00000604792 129 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AC112220.2-201ENST00000605513 533 ntBASIC1.87□□□□□ -2.11
VAPBO95292 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VAPBO95292 MIR5739-201ENST00000619803 80 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AC024581.2-201ENST00000619986 252 ntBASIC1.87□□□□□ -2.11
VAPBO95292 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPBO95292 RNU6-853P-201ENST00000364306 107 ntBASIC1.86□□□□□ -2.11
VAPBO95292 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
VAPBO95292 RNA5SP240-201ENST00000365355 128 ntBASIC1.86□□□□□ -2.11
VAPBO95292 SNORA40.2-201ENST00000390847 128 ntBASIC1.86□□□□□ -2.11
VAPBO95292 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VAPBO95292 AL079342.1-201ENST00000401460 267 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AL030996.1-201ENST00000411430 235 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AL953862.1-201ENST00000423016 168 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AC009238.1-201ENST00000442165 424 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AC009237.6-201ENST00000446969 424 ntBASIC1.86□□□□□ -2.11
VAPBO95292 CYP2C59P-201ENST00000457790 269 ntBASIC1.86□□□□□ -2.11
VAPBO95292 PMCHL2-203ENST00000457791 237 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AC010631.1-201ENST00000474150 156 ntBASIC1.86□□□□□ -2.11
VAPBO95292 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.86□□□□□ -2.11
VAPBO95292 TRBV12-1-201ENST00000479785 344 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AC007182.2-201ENST00000489251 402 ntBASIC1.86□□□□□ -2.11
VAPBO95292 SMURF2P1-201ENST00000514992 481 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AC023538.1-201ENST00000534576 736 ntBASIC1.86□□□□□ -2.11
VAPBO95292 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.86□□□□□ -2.11
VAPBO95292 AC060771.1-201ENST00000582031 164 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.86□□□□□ -2.11
VAPBO95292 AP001269.3-201ENST00000588718 329 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AC004908.2-201ENST00000609090 574 ntBASIC1.86□□□□□ -2.11
VAPBO95292 RNU6-1192P-201ENST00000612197 107 ntBASIC1.86□□□□□ -2.11
VAPBO95292 RNU6-489P-201ENST00000618289 107 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AP003476.1-201ENST00000623984 516 ntBASIC1.86□□□□□ -2.11
VAPBO95292 AC110994.2-201ENST00000635481 492 ntBASIC1.86□□□□□ -2.11
VAPBO95292 Z75746.1-201ENST00000440243 2080 ntBASIC1.86□□□□□ -2.11
VAPBO95292 DDX43P2-201ENST00000604753 1354 ntBASIC1.85□□□□□ -2.11
VAPBO95292 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VAPBO95292 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VAPBO95292 GSTA9P-201ENST00000406231 611 ntBASIC1.85□□□□□ -2.11
VAPBO95292 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.85□□□□□ -2.11
VAPBO95292 USP9YP6-201ENST00000413550 854 ntBASIC1.85□□□□□ -2.11
VAPBO95292 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.85□□□□□ -2.11
VAPBO95292 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
VAPBO95292 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.85□□□□□ -2.11
VAPBO95292 HMGB1P27-201ENST00000431429 603 ntBASIC1.85□□□□□ -2.11
VAPBO95292 ELOCP30-201ENST00000447108 299 ntBASIC1.85□□□□□ -2.11
VAPBO95292 RPL36AP48-201ENST00000485521 314 ntBASIC1.85□□□□□ -2.11
VAPBO95292 RPS29P21-201ENST00000496272 170 ntBASIC1.85□□□□□ -2.11
VAPBO95292 ROCK1P1-201ENST00000573767 549 ntBASIC1.85□□□□□ -2.11
VAPBO95292 AC090079.2-201ENST00000575289 768 ntBASIC1.85□□□□□ -2.11
VAPBO95292 NRBF2P1-201ENST00000587407 859 ntBASIC1.85□□□□□ -2.11
VAPBO95292 AC073544.2-201ENST00000601155 540 ntBASIC1.85□□□□□ -2.11
VAPBO95292 DPPA3P3-201ENST00000603842 430 ntBASIC1.85□□□□□ -2.11
VAPBO95292 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
VAPBO95292 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.85□□□□□ -2.11
VAPBO95292 AL109620.1-201ENST00000618738 1197 ntBASIC1.85□□□□□ -2.11
VAPBO95292 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VAPBO95292 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
VAPBO95292 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
VAPBO95292 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.84□□□□□ -2.11
VAPBO95292 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AC019129.1-201ENST00000403786 261 ntBASIC1.84□□□□□ -2.11
VAPBO95292 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.84□□□□□ -2.11
VAPBO95292 MIR1284-201ENST00000408337 120 ntBASIC1.84□□□□□ -2.11
VAPBO95292 EDDM3CP-201ENST00000415977 425 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPBO95292 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AC104651.1-201ENST00000427559 735 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms