Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC009901.1-201ENST00000506703 541 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC114786.4-201ENST00000508771 728 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 AC104027.1-201ENST00000521887 300 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 OR5AQ1P-201ENST00000527596 927 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NKX2-2O95096 AC011611.1-201ENST00000552179 197 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.03□□□□□ -1.92
NKX2-2O95096 MIR548AC-201ENST00000585049 88 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC090517.2-201ENST00000614966 680 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 MIR1321-201ENST00000637766 79 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.03□□□□□ -1.92
NKX2-2O95096 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-2O95096 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-2O95096 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-2O95096 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NKX2-2O95096 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-2O95096 RNU6-371P-201ENST00000364283 108 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-2O95096 SNORA69-201ENST00000383895 132 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 SNORA75B-201ENST00000384053 137 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 SNORA40C-201ENST00000391285 128 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 HSPE1P1-201ENST00000421494 318 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 RPS3AP44-201ENST00000425466 790 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 AL365496.1-201ENST00000426885 215 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 RN7SL442P-201ENST00000473804 320 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC022493.1-201ENST00000492984 337 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX2-2O95096 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 SCARNA20.6-201ENST00000517251 106 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 AC025755.1-201ENST00000521306 278 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NKX2-2O95096 HIF1AP1-201ENST00000553642 175 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC027807.1-201ENST00000559921 996 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 MIR4444-1-201ENST00000581696 74 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 MIR4444-2-201ENST00000584390 74 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 HMGN2P15-201ENST00000585707 270 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC004852.3-201ENST00000614131 326 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 AL161629.2-201ENST00000615347 275 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 U6.105-201ENST00000637379 88 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-2O95096 AC091564.4-201ENST00000533934 2194 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NKX2-2O95096 MTCO1P12-201ENST00000414273 1543 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 RIOK3P1-201ENST00000418778 1528 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 ELF2P3-201ENST00000445099 1506 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX2-2O95096 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX2-2O95096 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
NKX2-2O95096 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-2O95096 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
NKX2-2O95096 AL354685.2-201ENST00000448218 1447 ntBASIC3.02□□□□□ -1.93
NKX2-2O95096 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX2-2O95096 RNU6-799P-201ENST00000363567 107 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 RNY4P14-201ENST00000363656 96 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-2O95096 RNU6-483P-201ENST00000384088 108 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 MIR578-201ENST00000384828 96 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 AL139039.1-201ENST00000401900 692 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 RNU6-648P-201ENST00000410190 107 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 BPY2DP-201ENST00000422208 265 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX2-2O95096 AL353729.1-201ENST00000425044 720 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 RPL21P40-201ENST00000428586 483 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-2O95096 UBE2V1P8-201ENST00000437166 265 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NKX2-2O95096 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-2O95096 AL360271.2-201ENST00000447710 161 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 AC115115.1-201ENST00000449927 248 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 RNU7-180P-201ENST00000459240 63 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 AL049830.2-201ENST00000480072 201 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 RPS29P20-201ENST00000489592 171 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-2O95096 MTCO3P9-201ENST00000506989 781 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 AC011352.1-201ENST00000512300 793 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 RNU6-1281P-201ENST00000516223 105 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 Y_RNA.704-201ENST00000516851 102 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 MTND1P5-201ENST00000517906 940 ntBASIC3.01□□□□□ -1.93
NKX2-2O95096 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX2-2O95096 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX2-2O95096 MTCO3P24-201ENST00000572729 782 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms