Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SAGE2P-201ENST00000420011 2126 ntBASIC5.63□□□□□ -1.51
RNF40O75150 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RNF40O75150 MIR133B-201ENST00000362210 119 ntBASIC5.63□□□□□ -1.51
RNF40O75150 RNU1-106P-201ENST00000384382 164 ntBASIC5.63□□□□□ -1.51
RNF40O75150 MIR1250-201ENST00000408098 113 ntBASIC5.63□□□□□ -1.51
RNF40O75150 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF40O75150 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF40O75150 AC119751.6-201ENST00000416712 186 ntBASIC5.63□□□□□ -1.51
RNF40O75150 RPS27AP12-201ENST00000429552 465 ntBASIC5.63□□□□□ -1.51
RNF40O75150 AL772161.1-201ENST00000439130 476 ntBASIC5.63□□□□□ -1.51
RNF40O75150 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF40O75150 RPL10P17-201ENST00000453852 316 ntBASIC5.63□□□□□ -1.51
RNF40O75150 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF40O75150 AC007686.1-201ENST00000488511 463 ntBASIC5.63□□□□□ -1.51
RNF40O75150 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF40O75150 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF40O75150 AC107027.2-201ENST00000512197 115 ntBASIC5.63□□□□□ -1.51
RNF40O75150 AC022616.8-201ENST00000533569 253 ntBASIC5.63□□□□□ -1.51
RNF40O75150 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF40O75150 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF40O75150 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF40O75150 AL596275.2-206ENST00000641957 626 ntBASIC5.63□□□□□ -1.51
RNF40O75150 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.63□□□□□ -1.51
RNF40O75150 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF40O75150 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RNF40O75150 AL353743.1-202ENST00000431724 1695 ntBASIC5.63□□□□□ -1.51
RNF40O75150 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RNF40O75150 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF40O75150 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF40O75150 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF40O75150 AL022322.2-201ENST00000624072 20397 ntBASIC5.62□□□□□ -1.51
RNF40O75150 Y_RNA.319-201ENST00000365138 92 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RNU6-147P-201ENST00000383983 107 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RNU6-1144P-201ENST00000384247 104 ntBASIC5.62□□□□□ -1.51
RNF40O75150 SNORA67-201ENST00000384423 137 ntBASIC5.62□□□□□ -1.51
RNF40O75150 MIR34A-201ENST00000385130 110 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RNU6-159P-201ENST00000391080 106 ntBASIC5.62□□□□□ -1.51
RNF40O75150 MIR1271-201ENST00000408537 86 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RPL37P18-201ENST00000411602 243 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RPS12P23-201ENST00000419579 400 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RPL21P126-201ENST00000470049 478 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RN7SL97P-201ENST00000486780 299 ntBASIC5.62□□□□□ -1.51
RNF40O75150 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF40O75150 MIR4436B2-201ENST00000581415 91 ntBASIC5.62□□□□□ -1.51
RNF40O75150 MIR4436B1-201ENST00000583272 91 ntBASIC5.62□□□□□ -1.51
RNF40O75150 RN7SL435P-201ENST00000584418 282 ntBASIC5.62□□□□□ -1.51
RNF40O75150 AC069307.1-201ENST00000602820 447 ntBASIC5.62□□□□□ -1.51
RNF40O75150 AC068831.7-201ENST00000616954 363 ntBASIC5.62□□□□□ -1.51
RNF40O75150 AC092628.2-201ENST00000622492 339 ntBASIC5.62□□□□□ -1.51
RNF40O75150 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF40O75150 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF40O75150 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF40O75150 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF40O75150 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF40O75150 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
RNF40O75150 RNU6-270P-201ENST00000364131 105 ntBASIC5.61□□□□□ -1.51
RNF40O75150 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RNF40O75150 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RNF40O75150 HLFP1-201ENST00000402375 499 ntBASIC5.61□□□□□ -1.51
RNF40O75150 RN7SKP16-201ENST00000410180 299 ntBASIC5.61□□□□□ -1.51
RNF40O75150 RNU2-50P-201ENST00000410494 143 ntBASIC5.61□□□□□ -1.51
RNF40O75150 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF40O75150 AL365440.1-201ENST00000436135 2167 ntBASIC5.61□□□□□ -1.51
RNF40O75150 PSMD10P3-201ENST00000437000 448 ntBASIC5.61□□□□□ -1.51
RNF40O75150 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF40O75150 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF40O75150 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF40O75150 AC006499.6-201ENST00000511169 607 ntBASIC5.61□□□□□ -1.51
RNF40O75150 RAC1P5-201ENST00000512182 576 ntBASIC5.61□□□□□ -1.51
RNF40O75150 Y_RNA.797-201ENST00000515977 94 ntBASIC5.61□□□□□ -1.51
RNF40O75150 AP004242.1-201ENST00000533701 349 ntBASIC5.61□□□□□ -1.51
RNF40O75150 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF40O75150 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
RNF40O75150 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
RNF40O75150 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF40O75150 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF40O75150 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 RNU6-137P-201ENST00000363680 108 ntBASIC5.6□□□□□ -1.51
RNF40O75150 RNU1-43P-201ENST00000365052 165 ntBASIC5.6□□□□□ -1.51
RNF40O75150 SNORA16A-201ENST00000384342 137 ntBASIC5.6□□□□□ -1.51
RNF40O75150 RNU6-376P-201ENST00000384731 106 ntBASIC5.6□□□□□ -1.51
RNF40O75150 RNU6-578P-201ENST00000390980 103 ntBASIC5.6□□□□□ -1.51
RNF40O75150 AL078599.1-201ENST00000402075 293 ntBASIC5.6□□□□□ -1.51
RNF40O75150 AL009179.1-201ENST00000406085 265 ntBASIC5.6□□□□□ -1.51
RNF40O75150 EIF1AXP1-201ENST00000419267 435 ntBASIC5.6□□□□□ -1.51
RNF40O75150 OR2AH1P-201ENST00000425717 928 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms