Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR3133-201ENST00000583157 78 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 AC005255.1-201ENST00000593748 216 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.3□□□□□ -1.56
PTCD1O75127 MIR6868-201ENST00000611215 58 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 EOGT-210ENST00000615922 1931 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
PTCD1O75127 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCD1O75127 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCD1O75127 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCD1O75127 OR4G2P-202ENST00000641004 1759 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCD1O75127 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCD1O75127 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PTCD1O75127 RNU6-213P-201ENST00000384051 104 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 RNU6-713P-201ENST00000384761 107 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 LAP3P1-201ENST00000403648 294 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCD1O75127 MIR1179-201ENST00000408703 91 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 AL030996.1-201ENST00000411430 235 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 RAB9AP3-201ENST00000412737 573 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 CYCSP33-201ENST00000414485 327 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCD1O75127 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCD1O75127 RAB9AP1-201ENST00000449393 573 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 AL591623.2-201ENST00000449978 222 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 AL031274.1-201ENST00000450334 232 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCD1O75127 AC108860.1-201ENST00000484521 383 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.29□□□□□ -1.56
PTCD1O75127 RNU6-475P-201ENST00000516073 104 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.29□□□□□ -1.56
PTCD1O75127 SUB1P3-201ENST00000564581 315 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 AC022968.1-201ENST00000567372 442 ntBASIC5.29□□□□□ -1.56
PTCD1O75127 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCD1O75127 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCD1O75127 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PTCD1O75127 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PTCD1O75127 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
PTCD1O75127 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
PTCD1O75127 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCD1O75127 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCD1O75127 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PTCD1O75127 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCD1O75127 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PTCD1O75127 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCD1O75127 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PTCD1O75127 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 AL365440.1-201ENST00000436135 2167 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PTCD1O75127 Y_RNA.48-201ENST00000362710 103 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 RNU6-1159P-201ENST00000362933 107 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 RNA5SP372-201ENST00000390836 115 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 AL353621.1-201ENST00000418219 243 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 RPS12P23-201ENST00000419579 400 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCD1O75127 UBE2D3P2-201ENST00000424409 445 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 RPL23AP31-201ENST00000456160 467 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 AC011005.2-201ENST00000487324 359 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 AC108022.1-201ENST00000493466 478 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 RN7SKP46-201ENST00000515942 234 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 RNU6-1315P-201ENST00000517187 99 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 MIR4273-201ENST00000582824 84 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 AC107294.1-201ENST00000609524 467 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 AC103858.2-201ENST00000621471 543 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PTCD1O75127 AL359854.1-201ENST00000614203 1594 ntBASIC5.28□□□□□ -1.56
PTCD1O75127 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCD1O75127 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCD1O75127 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PTCD1O75127 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD1O75127 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD1O75127 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD1O75127 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.27□□□□□ -1.57
PTCD1O75127 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTCD1O75127 Y_RNA.380-201ENST00000365663 111 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 Y_RNA.785-201ENST00000384290 109 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 RNU6-933P-201ENST00000384424 107 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 MIR195-201ENST00000385194 87 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 MIR301A-201ENST00000385261 86 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 RNU2-14P-201ENST00000411053 191 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 AC093578.1-201ENST00000415219 368 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCD1O75127 CYP4F29P-201ENST00000420685 446 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCD1O75127 ELOCP20-201ENST00000422460 345 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 YME1L1P1-201ENST00000429435 297 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 CHEK2P4-201ENST00000450340 246 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 RPL17P19-201ENST00000489069 552 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 HMGB1P35-201ENST00000503360 598 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 ACA59.1-201ENST00000515966 143 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 RNU6-255P-201ENST00000516957 105 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 RNU6-182P-201ENST00000516970 105 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms