Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AL669831.1-202ENST00000428504 417 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.06□□□□□ -1.92
ZIC3O60481 ERLEC1P1-201ENST00000433806 578 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 GTF2IP13-201ENST00000438487 386 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 Z82210.1-201ENST00000440037 231 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 RPS15AP27-201ENST00000449183 343 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 SCARNA18-201ENST00000459004 134 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AL135752.1-201ENST00000479477 471 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AL049830.2-201ENST00000480072 201 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AC009901.1-201ENST00000506703 541 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.06□□□□□ -1.92
ZIC3O60481 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.06□□□□□ -1.92
ZIC3O60481 BNIP3P6-201ENST00000549284 499 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AC011611.1-201ENST00000552179 197 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AL513302.2-201ENST00000562313 1842 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.06□□□□□ -1.92
ZIC3O60481 AC018638.8-201ENST00000588755 281 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 SRGNP1-201ENST00000603392 451 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.06□□□□□ -1.92
ZIC3O60481 Z99571.1-201ENST00000636677 394 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ZIC3O60481 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.06□□□□□ -1.92
ZIC3O60481 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ZIC3O60481 ZNF807-201ENST00000328088 1707 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ZIC3O60481 RNA5SP197-201ENST00000363357 119 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 RNU6-371P-201ENST00000364283 108 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 Y_RNA.245-201ENST00000364493 95 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 RNU6-715P-201ENST00000365204 103 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ZIC3O60481 MIR325-201ENST00000385260 98 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.05□□□□□ -1.92
ZIC3O60481 AL139039.1-201ENST00000401900 692 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ZIC3O60481 Y_RNA.615-201ENST00000410769 117 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 AC007390.1-201ENST00000415722 356 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
ZIC3O60481 AC005300.1-201ENST00000428401 373 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 RPL37P6-201ENST00000460682 294 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 RPS23P3-201ENST00000470993 430 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.05□□□□□ -1.92
ZIC3O60481 RPL21P93-201ENST00000480465 489 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.05□□□□□ -1.92
ZIC3O60481 AC025465.4-201ENST00000513422 638 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 LRRC34P2-201ENST00000514850 553 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 RNA5SP290-201ENST00000517133 127 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 RNA5SP291-201ENST00000517222 105 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.05□□□□□ -1.92
ZIC3O60481 AC023050.3-201ENST00000541142 333 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.05□□□□□ -1.92
ZIC3O60481 AC136601.2-201ENST00000604356 474 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 AL512643.1-201ENST00000635735 524 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 AC100810.6-201ENST00000638068 285 ntBASIC3.05□□□□□ -1.92
ZIC3O60481 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ZIC3O60481 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ZIC3O60481 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.05□□□□□ -1.92
ZIC3O60481 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ZIC3O60481 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.04□□□□□ -1.92
ZIC3O60481 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.04□□□□□ -1.92
ZIC3O60481 AL049641.1-201ENST00000441055 1948 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ZIC3O60481 Y_RNA.72-201ENST00000362894 103 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 Y_RNA.167-201ENST00000363735 109 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 SNORD46.1-201ENST00000364139 104 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 U3.12-201ENST00000364498 214 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 Y_RNA.378-201ENST00000365652 113 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 SNORA16.2-201ENST00000390991 127 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AL591034.1-201ENST00000407447 340 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AL158156.1-201ENST00000422509 473 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.04□□□□□ -1.92
ZIC3O60481 GPM6BP2-201ENST00000432046 144 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AC092573.2-201ENST00000434546 243 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 GPM6BP1-201ENST00000446387 144 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AC008264.1-201ENST00000447612 367 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 MTND5P20-201ENST00000448677 143 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.04□□□□□ -1.92
ZIC3O60481 RPS4XP2-201ENST00000458402 793 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 RPL21P41-201ENST00000459863 264 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.04□□□□□ -1.92
ZIC3O60481 AP000852.1-201ENST00000472460 573 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 TRBV1-201ENST00000476502 284 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.04□□□□□ -1.92
ZIC3O60481 RNU6-1038P-201ENST00000516516 104 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 RNU6-1282P-201ENST00000516735 96 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.04□□□□□ -1.92
ZIC3O60481 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.04□□□□□ -1.92
ZIC3O60481 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.04□□□□□ -1.92
ZIC3O60481 OR11H5P-201ENST00000554039 926 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.04□□□□□ -1.92
ZIC3O60481 MTCO3P23-201ENST00000561363 289 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AC005730.3-201ENST00000583067 366 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AC012468.1-201ENST00000604888 430 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms