Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.81□□□□□ -1.64
GRIN3BO60391 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.81□□□□□ -1.64
GRIN3BO60391 RNU6-1332P-201ENST00000516666 104 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 RNU6-1213P-201ENST00000517075 94 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 RNU1-54P-201ENST00000517181 120 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
GRIN3BO60391 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.81□□□□□ -1.64
GRIN3BO60391 AC018462.2-201ENST00000605375 395 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 AC083806.3-201ENST00000614016 455 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 PISRT1.1-201ENST00000616930 107 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 ZNF962P-201ENST00000443465 3140 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
GRIN3BO60391 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 AL049641.1-201ENST00000441055 1948 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.8□□□□□ -1.64
GRIN3BO60391 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.8□□□□□ -1.64
GRIN3BO60391 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 Y_RNA.158-201ENST00000363651 101 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 SNORD35B-201ENST00000363660 87 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 RNU1-33P-201ENST00000364249 162 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 Y_RNA.252-201ENST00000364556 101 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 RNU6-1032P-201ENST00000384100 107 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIN3BO60391 RPS12P24-201ENST00000412619 387 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIN3BO60391 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIN3BO60391 RPS24P6-201ENST00000452670 400 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 RPL21P10-201ENST00000463521 490 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 AC104472.2-201ENST00000469035 601 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AC008489.1-201ENST00000524271 483 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GRIN3BO60391 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AL117187.1-201ENST00000555482 181 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 AC009812.4-201ENST00000569134 1805 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.8□□□□□ -1.64
GRIN3BO60391 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 SDAD1P2-201ENST00000441308 2028 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIN3BO60391 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.8□□□□□ -1.64
GRIN3BO60391 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AL365440.1-201ENST00000436135 2167 ntBASIC4.8□□□□□ -1.64
GRIN3BO60391 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GRIN3BO60391 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.79□□□□□ -1.64
GRIN3BO60391 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 RNU6-371P-201ENST00000364283 108 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 RNU6-890P-201ENST00000384121 107 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 RNU6-214P-201ENST00000384130 107 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 SNORA36C-201ENST00000384289 132 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 SNORA75.6-201ENST00000391318 127 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 MCFD2P1-201ENST00000417812 300 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.79□□□□□ -1.64
GRIN3BO60391 AL590632.1-201ENST00000424289 371 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 HMGB1P27-201ENST00000431429 603 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 RPL26P6-201ENST00000440913 438 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 RPL21P41-201ENST00000459863 264 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 RPL23AP65-201ENST00000475608 468 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.79□□□□□ -1.64
GRIN3BO60391 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 AC026371.1-201ENST00000551867 419 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 HMGB3P26-201ENST00000560051 582 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.79□□□□□ -1.64
GRIN3BO60391 SNORD84-203ENST00000584275 78 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AC244505.7-201ENST00000599675 272 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AC012119.1-201ENST00000603184 222 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AC012603.1-201ENST00000606424 528 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 MIR15A-201ENST00000607334 83 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AC006065.5-201ENST00000623427 349 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIN3BO60391 NOL8P1-201ENST00000508336 3529 ntBASIC4.79□□□□□ -1.64
GRIN3BO60391 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIN3BO60391 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms