Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
LCMT2O60294 RNA5SP471-201ENST00000516971 106 ntBASIC2.51□□□□□ -2.01
LCMT2O60294 RNA5SP337-201ENST00000517007 109 ntBASIC2.51□□□□□ -2.01
LCMT2O60294 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.51□□□□□ -2.01
LCMT2O60294 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.51□□□□□ -2.01
LCMT2O60294 MIR3117-201ENST00000584034 78 ntBASIC2.51□□□□□ -2.01
LCMT2O60294 AC110760.3-201ENST00000598794 467 ntBASIC2.51□□□□□ -2.01
LCMT2O60294 AC091304.9-201ENST00000612091 226 ntBASIC2.51□□□□□ -2.01
LCMT2O60294 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.51□□□□□ -2.01
LCMT2O60294 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.51□□□□□ -2.01
LCMT2O60294 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LCMT2O60294 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LCMT2O60294 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LCMT2O60294 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LCMT2O60294 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 RNU5E-1-201ENST00000362477 120 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 RNU6-297P-201ENST00000384636 107 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 RNY3P10-201ENST00000384764 102 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LCMT2O60294 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LCMT2O60294 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.5□□□□□ -2.01
LCMT2O60294 MIR888-201ENST00000401186 77 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 RNU2-49P-201ENST00000410666 184 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 AC063976.3-201ENST00000426849 329 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 ARL5AP4-201ENST00000430731 512 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 AC011816.1-201ENST00000441346 546 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 CACYBPP2-201ENST00000453625 678 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 AC027673.1-201ENST00000456245 405 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.5□□□□□ -2.01
LCMT2O60294 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 EIF4EP3-201ENST00000498782 656 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.5□□□□□ -2.01
LCMT2O60294 SNORA31.3-201ENST00000516029 96 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 Y_RNA.688-201ENST00000516565 95 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 RNU2-46P-201ENST00000517038 113 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 RNA5SP290-201ENST00000517133 127 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 AP000889.1-201ENST00000530968 660 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.5□□□□□ -2.01
LCMT2O60294 AC068276.1-201ENST00000605793 379 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 AC034102.8-201ENST00000615146 484 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 CU459211.1-201ENST00000635667 749 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.5□□□□□ -2.01
LCMT2O60294 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.5□□□□□ -2.01
LCMT2O60294 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LCMT2O60294 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LCMT2O60294 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LCMT2O60294 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LCMT2O60294 RNU6-859P-201ENST00000362728 107 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 MIR34A-201ENST00000385130 110 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 MIR1302-8-201ENST00000408342 128 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.49□□□□□ -2.01
LCMT2O60294 AC023141.4-201ENST00000412031 328 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.49□□□□□ -2.01
LCMT2O60294 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.49□□□□□ -2.01
LCMT2O60294 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.49□□□□□ -2.01
LCMT2O60294 MTND6P13-201ENST00000443510 523 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AL109933.2-201ENST00000452651 260 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 MTND1P12-201ENST00000455231 147 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.49□□□□□ -2.01
LCMT2O60294 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.49□□□□□ -2.01
LCMT2O60294 AC096725.1-201ENST00000514266 313 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 SCARNA17.1-201ENST00000516211 143 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 SCARNA17.2-201ENST00000516334 143 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.49□□□□□ -2.01
LCMT2O60294 AC090136.1-201ENST00000520009 240 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LCMT2O60294 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LCMT2O60294 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.49□□□□□ -2.01
LCMT2O60294 BNIP3P8-201ENST00000597863 560 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AL590229.1-201ENST00000603497 542 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AC007363.1-201ENST00000604736 620 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 AC025594.3-201ENST00000613068 790 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 SCARNA17.4-201ENST00000614296 143 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.49□□□□□ -2.01
LCMT2O60294 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LCMT2O60294 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.49□□□□□ -2.01
LCMT2O60294 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.48□□□□□ -2.01
LCMT2O60294 FGF7P2-201ENST00000332473 296 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 RNU6-1167P-201ENST00000363227 94 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 U8.3-201ENST00000363321 132 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 RNU5E-6P-201ENST00000365574 115 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LCMT2O60294 RPS3AP3-201ENST00000411933 242 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms