Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 PRO1804-201ENST00000623780 2050 ntBASIC3.82□□□□□ -1.8
FOXS1O43638 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FOXS1O43638 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXS1O43638 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXS1O43638 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXS1O43638 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXS1O43638 Y_RNA.26-201ENST00000362539 101 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 Y_RNA.48-201ENST00000362710 103 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 Y_RNA.64-201ENST00000362845 102 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 Y_RNA.117-201ENST00000363294 101 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 RNU6-770P-201ENST00000363929 105 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 RNU6-790P-201ENST00000384479 105 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 MIR578-201ENST00000384828 96 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 RNU6-1093P-201ENST00000391194 107 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 HSPE1P8-201ENST00000406997 288 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 RNU6-628P-201ENST00000410675 107 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXS1O43638 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXS1O43638 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXS1O43638 AL590664.1-201ENST00000448065 339 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 EIF4A1P11-201ENST00000451239 222 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 snoU13.3-201ENST00000459441 104 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.81□□□□□ -1.8
FOXS1O43638 HMGB3P17-201ENST00000504195 649 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 RNU6-914P-201ENST00000516749 109 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 SNRPGP16-201ENST00000533275 226 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXS1O43638 AC006600.1-201ENST00000572529 153 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXS1O43638 VN1R91P-201ENST00000594377 169 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.81□□□□□ -1.8
FOXS1O43638 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXS1O43638 AC096772.1-201ENST00000609146 564 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 AC098479.1-201ENST00000609225 154 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
FOXS1O43638 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXS1O43638 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXS1O43638 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXS1O43638 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXS1O43638 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXS1O43638 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXS1O43638 AC107027.3-201ENST00000565095 3473 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
FOXS1O43638 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXS1O43638 RNA5SP388-201ENST00000362584 119 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 RNY3P11-201ENST00000364153 102 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 RN7SKP280-201ENST00000364196 304 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 RNU4-50P-201ENST00000364361 141 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 RNU6-806P-201ENST00000365147 105 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXS1O43638 Y_RNA.534-201ENST00000384599 112 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 MIR513A2-201ENST00000385249 127 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 RNU6-712P-201ENST00000410558 100 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 RPL7AP73-201ENST00000413490 353 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 CYCSP33-201ENST00000414485 327 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 RPS15AP6-201ENST00000420703 385 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 AC139712.2-201ENST00000424302 339 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 AL691449.1-201ENST00000426570 421 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 HMGB1P27-201ENST00000431429 603 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXS1O43638 AL121871.1-201ENST00000443413 436 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 MTND4LP30-201ENST00000454092 297 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXS1O43638 AC025465.3-201ENST00000510570 311 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 ACA59.1-201ENST00000515966 143 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 SNORA31.22-201ENST00000517204 135 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXS1O43638 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXS1O43638 AC022968.1-201ENST00000567372 442 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 MIR4273-201ENST00000582824 84 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 AC067852.4-201ENST00000590314 478 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXS1O43638 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXS1O43638 ZNF285B-201ENST00000561698 1767 ntBASIC3.8□□□□□ -1.8
FOXS1O43638 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.8□□□□□ -1.8
FOXS1O43638 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXS1O43638 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXS1O43638 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
FOXS1O43638 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXS1O43638 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXS1O43638 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXS1O43638 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FOXS1O43638 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXS1O43638 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
FOXS1O43638 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
FOXS1O43638 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXS1O43638 AC015813.6-201ENST00000624409 5808 ntBASIC3.79□□□□□ -1.8
FOXS1O43638 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXS1O43638 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXS1O43638 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXS1O43638 Y_RNA.19-201ENST00000362462 99 ntBASIC3.79□□□□□ -1.8
FOXS1O43638 RNU6-1249P-201ENST00000363237 111 ntBASIC3.79□□□□□ -1.8
FOXS1O43638 Y_RNA.477-201ENST00000384352 108 ntBASIC3.79□□□□□ -1.8
FOXS1O43638 Y_RNA.478-201ENST00000384358 107 ntBASIC3.79□□□□□ -1.8
FOXS1O43638 MIR625-201ENST00000385047 85 ntBASIC3.79□□□□□ -1.8
FOXS1O43638 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXS1O43638 RPL12P46-201ENST00000436610 195 ntBASIC3.79□□□□□ -1.8
FOXS1O43638 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXS1O43638 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms