Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.73□□□□□ -2.13
SGCEO43556 AL353689.1-201ENST00000438895 199 ntBASIC1.73□□□□□ -2.13
SGCEO43556 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.73□□□□□ -2.13
SGCEO43556 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.73□□□□□ -2.13
SGCEO43556 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
SGCEO43556 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.73□□□□□ -2.13
SGCEO43556 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.73□□□□□ -2.13
SGCEO43556 RPL23AP42-201ENST00000471152 471 ntBASIC1.73□□□□□ -2.13
SGCEO43556 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
SGCEO43556 RPL36AP48-201ENST00000485521 314 ntBASIC1.73□□□□□ -2.13
SGCEO43556 SMURF2P1-201ENST00000514992 481 ntBASIC1.73□□□□□ -2.13
SGCEO43556 SNORA31.23-201ENST00000517219 133 ntBASIC1.73□□□□□ -2.13
SGCEO43556 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SGCEO43556 AC021451.1-201ENST00000523498 1129 ntBASIC1.73□□□□□ -2.13
SGCEO43556 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
SGCEO43556 AC091544.4-201ENST00000555268 342 ntBASIC1.73□□□□□ -2.13
SGCEO43556 BNIP3P23-201ENST00000599655 511 ntBASIC1.73□□□□□ -2.13
SGCEO43556 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.73□□□□□ -2.13
SGCEO43556 AL109620.1-201ENST00000618738 1197 ntBASIC1.73□□□□□ -2.13
SGCEO43556 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.73□□□□□ -2.13
SGCEO43556 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SGCEO43556 AC104454.1-201ENST00000421341 1401 ntBASIC1.73□□□□□ -2.13
SGCEO43556 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
SGCEO43556 U8.2-201ENST00000363156 134 ntBASIC1.72□□□□□ -2.13
SGCEO43556 RNU6-253P-201ENST00000384730 105 ntBASIC1.72□□□□□ -2.13
SGCEO43556 U8.14-201ENST00000390843 143 ntBASIC1.72□□□□□ -2.13
SGCEO43556 SNORA40.19-201ENST00000390846 128 ntBASIC1.72□□□□□ -2.13
SGCEO43556 HMGN2P39-201ENST00000398005 273 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AL590084.1-201ENST00000407885 387 ntBASIC1.72□□□□□ -2.13
SGCEO43556 RPL21P24-201ENST00000413752 448 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.72□□□□□ -2.13
SGCEO43556 AL160275.3-201ENST00000423876 471 ntBASIC1.72□□□□□ -2.13
SGCEO43556 HMGN2P19-201ENST00000425149 265 ntBASIC1.72□□□□□ -2.13
SGCEO43556 ISCA1P1-201ENST00000426679 387 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC013262.1-201ENST00000426710 252 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AL161788.1-201ENST00000441805 169 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.72□□□□□ -2.13
SGCEO43556 FABP5P15-201ENST00000453566 214 ntBASIC1.72□□□□□ -2.13
SGCEO43556 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC010631.1-201ENST00000474150 156 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.72□□□□□ -2.13
SGCEO43556 RN7SKP258-201ENST00000517151 304 ntBASIC1.72□□□□□ -2.13
SGCEO43556 HSPE1P18-201ENST00000517602 280 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.72□□□□□ -2.13
SGCEO43556 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.72□□□□□ -2.13
SGCEO43556 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.72□□□□□ -2.13
SGCEO43556 AC023538.1-201ENST00000534576 736 ntBASIC1.72□□□□□ -2.13
SGCEO43556 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.72□□□□□ -2.13
SGCEO43556 DUXAP1-201ENST00000556632 463 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.72□□□□□ -2.13
SGCEO43556 AL512347.1-201ENST00000566420 503 ntBASIC1.72□□□□□ -2.13
SGCEO43556 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.72□□□□□ -2.13
SGCEO43556 MIR5089-201ENST00000580047 84 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AL021368.1-201ENST00000607490 540 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AC004908.2-201ENST00000609090 574 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.72□□□□□ -2.13
SGCEO43556 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.72□□□□□ -2.13
SGCEO43556 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.72□□□□□ -2.13
SGCEO43556 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SGCEO43556 AC091953.2-201ENST00000623979 160 ntBASIC1.72□□□□□ -2.13
SGCEO43556 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.72□□□□□ -2.13
SGCEO43556 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.72□□□□□ -2.13
SGCEO43556 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.72□□□□□ -2.13
SGCEO43556 AC103710.2-202ENST00000641454 2853 ntBASIC1.72□□□□□ -2.13
SGCEO43556 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
SGCEO43556 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SGCEO43556 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
SGCEO43556 Y_RNA.408-201ENST00000383987 102 ntBASIC1.71□□□□□ -2.14
SGCEO43556 RNU6-224P-201ENST00000384055 107 ntBASIC1.71□□□□□ -2.14
SGCEO43556 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SGCEO43556 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SGCEO43556 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.71□□□□□ -2.14
SGCEO43556 RPL7P34-201ENST00000433316 712 ntBASIC1.71□□□□□ -2.14
SGCEO43556 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SGCEO43556 MTCO1P53-201ENST00000441633 699 ntBASIC1.71□□□□□ -2.14
SGCEO43556 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.71□□□□□ -2.14
SGCEO43556 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.71□□□□□ -2.14
SGCEO43556 AC106872.3-201ENST00000495104 446 ntBASIC1.71□□□□□ -2.14
SGCEO43556 AC091965.2-201ENST00000512324 613 ntBASIC1.71□□□□□ -2.14
SGCEO43556 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.71□□□□□ -2.14
SGCEO43556 RNY4P37-201ENST00000516225 96 ntBASIC1.71□□□□□ -2.14
SGCEO43556 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SGCEO43556 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.71□□□□□ -2.14
SGCEO43556 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.71□□□□□ -2.14
SGCEO43556 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.71□□□□□ -2.14
SGCEO43556 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.71□□□□□ -2.14
SGCEO43556 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.71□□□□□ -2.14
SGCEO43556 MIR4648-201ENST00000580107 72 ntBASIC1.71□□□□□ -2.14
SGCEO43556 MIR4513-201ENST00000581077 86 ntBASIC1.71□□□□□ -2.14
SGCEO43556 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.71□□□□□ -2.14
SGCEO43556 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.71□□□□□ -2.14
SGCEO43556 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SGCEO43556 AC008507.2-201ENST00000588402 1176 ntBASIC1.71□□□□□ -2.14
SGCEO43556 AC109809.1-201ENST00000619665 545 ntBASIC1.71□□□□□ -2.14
SGCEO43556 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SGCEO43556 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SGCEO43556 DDX43P2-201ENST00000604753 1354 ntBASIC1.71□□□□□ -2.14
SGCEO43556 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.7□□□□□ -2.14
SGCEO43556 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SGCEO43556 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms