Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RPL21P40-201ENST00000428586 483 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 AL158071.1-201ENST00000430315 461 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 UBE2V1P13-201ENST00000436983 439 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 RPS29P15-201ENST00000458329 171 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 RPL23AP14-201ENST00000468281 468 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 RPL21P99-201ENST00000480369 423 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.4□□□□□ -1.87
SMAD6O43541 AC105417.1-201ENST00000514691 285 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 Y_RNA.665-201ENST00000516177 98 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 RNU6-711P-201ENST00000517255 106 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 IGKV2D-36-201ENST00000518643 226 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD6O43541 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.4□□□□□ -1.87
SMAD6O43541 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 RPL21P12-201ENST00000559810 515 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 MIR3671-201ENST00000580455 88 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD6O43541 AL121655.1-201ENST00000605811 308 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 AC103710.2-201ENST00000609912 942 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 MIR7112-201ENST00000616126 65 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD6O43541 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SMAD6O43541 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.4□□□□□ -1.87
SMAD6O43541 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SMAD6O43541 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.39□□□□□ -1.87
SMAD6O43541 AC073343.1-201ENST00000328239 651 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 RNU6-263P-201ENST00000363811 107 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 RNU6-38P-201ENST00000384085 107 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 RNU6-43P-201ENST00000384302 107 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 MIR19A-201ENST00000384878 82 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 MIR558-201ENST00000384920 94 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 MIR454-201ENST00000390180 115 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SMAD6O43541 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SMAD6O43541 SAR1AP2-201ENST00000392696 594 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD6O43541 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD6O43541 RNU4-26P-201ENST00000410270 107 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AC063979.1-201ENST00000415539 377 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD6O43541 MTATP6P16-201ENST00000434543 526 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD6O43541 Z75741.1-201ENST00000446793 314 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 RNU6-333P-201ENST00000459117 107 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.39□□□□□ -1.87
SMAD6O43541 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
SMAD6O43541 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.39□□□□□ -1.87
SMAD6O43541 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD6O43541 RN7SKP219-201ENST00000516825 296 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD6O43541 RPL7P20-201ENST00000520308 745 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD6O43541 AC128657.1-201ENST00000549459 145 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 FRG2DP-202ENST00000566967 323 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AL669831.4-202ENST00000590817 238 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.39□□□□□ -1.87
SMAD6O43541 AL133393.1-201ENST00000603277 287 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AL161756.2-201ENST00000604597 246 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AC245517.5-201ENST00000611529 162 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 AC040896.1-201ENST00000613819 479 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
SMAD6O43541 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.39□□□□□ -1.87
SMAD6O43541 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.39□□□□□ -1.87
SMAD6O43541 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD6O43541 AC004972.1-201ENST00000623934 2209 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 Z83843.1-201ENST00000604070 3685 ntBASIC3.39□□□□□ -1.87
SMAD6O43541 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD6O43541 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD6O43541 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SMAD6O43541 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD6O43541 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD6O43541 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD6O43541 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SMAD6O43541 MIR369-201ENST00000362155 70 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 Y_RNA.100-201ENST00000363141 102 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 Y_RNA.128-201ENST00000363391 112 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 SNORA62.1-201ENST00000364287 154 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 SNORA4.3-201ENST00000365564 137 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 SNORD42.2-201ENST00000365570 69 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 Y_RNA.373-201ENST00000365600 103 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 MIR559-201ENST00000385188 96 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 SNORA11.1-201ENST00000408133 129 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AC018630.2-202ENST00000422992 927 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD6O43541 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD6O43541 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD6O43541 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD6O43541 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD6O43541 RAC1P7-201ENST00000445367 377 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AC008264.1-201ENST00000447612 367 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD6O43541 snoU13.4-201ENST00000458916 104 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AC092436.1-201ENST00000506450 503 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 FAM206BP-201ENST00000510179 541 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD6O43541 RNU6-1170P-201ENST00000515974 106 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD6O43541 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms