Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXA2O43364 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA2O43364 AL121839.2-201ENST00000565058 6943 ntBASIC5.47□□□□□ -1.53
HOXA2O43364 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA2O43364 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXA2O43364 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
HOXA2O43364 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA2O43364 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.46□□□□□ -1.53
HOXA2O43364 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA2O43364 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA2O43364 Y_RNA.400-201ENST00000383963 111 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 Y_RNA.568-201ENST00000384742 113 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AL357139.1-201ENST00000407792 426 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 RNU6-1245P-201ENST00000411130 106 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 RNU6-1001P-201ENST00000411265 100 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AC016397.1-201ENST00000412463 242 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 RPS12P23-201ENST00000419579 400 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AL590383.1-201ENST00000428602 75 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 SSXP4-201ENST00000451349 245 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 RPS29P33-201ENST00000456717 146 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 KC877373.1-201ENST00000479066 408 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXA2O43364 AC107016.1-201ENST00000550463 337 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXA2O43364 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXA2O43364 BPIFA4P-203ENST00000603168 689 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AL391358.1-201ENST00000605342 190 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AC005828.6-201ENST00000606610 232 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 uc_338.18-201ENST00000615451 175 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 MIR6133-201ENST00000617057 108 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 MIR6839-201ENST00000620425 113 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 AC000095.2-202ENST00000637415 154 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 U6.99-201ENST00000637524 83 ntBASIC5.46□□□□□ -1.54
HOXA2O43364 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA2O43364 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HOXA2O43364 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXA2O43364 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA2O43364 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXA2O43364 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
HOXA2O43364 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA2O43364 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA2O43364 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXA2O43364 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
HOXA2O43364 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA2O43364 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA2O43364 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HOXA2O43364 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HOXA2O43364 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA2O43364 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HOXA2O43364 AL136964.1-201ENST00000622038 2990 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXA2O43364 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXA2O43364 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 SNORA2.3-201ENST00000383920 135 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 RNU6-142P-201ENST00000384019 107 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 MIR10B-201ENST00000385011 110 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 SNORA40.19-201ENST00000390846 128 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 RNU6-131P-201ENST00000391144 107 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 RNA5SP113-201ENST00000410486 84 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 RPL27AP8-201ENST00000424277 446 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXA2O43364 RPL19P16-201ENST00000433839 588 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXA2O43364 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXA2O43364 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA2O43364 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXA2O43364 AP004371.1-201ENST00000525240 214 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 KLKP1-201ENST00000595979 403 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 AC005176.2-201ENST00000596933 147 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 MIR6780A-201ENST00000615089 68 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 AC068831.7-201ENST00000616954 363 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA2O43364 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA2O43364 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HOXA2O43364 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA2O43364 AC140134.1-201ENST00000511830 3544 ntBASIC5.45□□□□□ -1.54
HOXA2O43364 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXA2O43364 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA2O43364 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA2O43364 AC099654.2-201ENST00000433031 1980 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA2O43364 RNU6-137P-201ENST00000363680 108 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 RNU6-961P-201ENST00000363893 105 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 Y_RNA.217-201ENST00000364214 105 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 RNU6-1279P-201ENST00000383917 103 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 MIR141-201ENST00000384975 95 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HOXA2O43364 RPS16P5-201ENST00000406501 404 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 U3.37-201ENST00000408528 213 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA2O43364 WARS2P1-201ENST00000429678 537 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 AC011753.3-201ENST00000443436 406 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 AC009220.1-201ENST00000451614 275 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 RPL23AP3-201ENST00000453844 468 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA2O43364 Y_RNA.641-201ENST00000459414 105 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 SNORA43.2-201ENST00000516652 128 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 SNORA31.20-201ENST00000517111 133 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA2O43364 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms