Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL391646.1-201ENST00000603860 190 ntBASIC2.95□□□□□ -1.94
TO15178 AC025449.1-201ENST00000603896 529 ntBASIC2.95□□□□□ -1.94
TO15178 AC004805.2-201ENST00000605382 482 ntBASIC2.95□□□□□ -1.94
TO15178 AL158032.1-201ENST00000605401 106 ntBASIC2.95□□□□□ -1.94
TO15178 YPEL5P2-201ENST00000605553 359 ntBASIC2.95□□□□□ -1.94
TO15178 AC008536.2-201ENST00000607284 349 ntBASIC2.95□□□□□ -1.94
TO15178 AC012409.4-201ENST00000612923 249 ntBASIC2.95□□□□□ -1.94
TO15178 uc_338.25-201ENST00000613756 156 ntBASIC2.95□□□□□ -1.94
TO15178 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.95□□□□□ -1.94
TO15178 SEPT14P19-203ENST00000633205 211 ntBASIC2.95□□□□□ -1.94
TO15178 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
TO15178 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
TO15178 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.95□□□□□ -1.94
TO15178 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TO15178 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
TO15178 AC103710.2-202ENST00000641454 2853 ntBASIC2.94□□□□□ -1.94
TO15178 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.94□□□□□ -1.94
TO15178 GABRG2-229ENST00000641017 3628 ntBASIC2.94□□□□□ -1.94
TO15178 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TO15178 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
TO15178 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
TO15178 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TO15178 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TO15178 Y_RNA.3-201ENST00000362331 103 ntBASIC2.94□□□□□ -1.94
TO15178 SNORA62.1-201ENST00000364287 154 ntBASIC2.94□□□□□ -1.94
TO15178 SNORA7.4-201ENST00000384249 137 ntBASIC2.94□□□□□ -1.94
TO15178 MTCO3P40-201ENST00000392516 676 ntBASIC2.94□□□□□ -1.94
TO15178 RPL21P75-201ENST00000396599 483 ntBASIC2.94□□□□□ -1.94
TO15178 RPL21P28-201ENST00000401418 483 ntBASIC2.94□□□□□ -1.94
TO15178 AL592114.1-201ENST00000403842 483 ntBASIC2.94□□□□□ -1.94
TO15178 RNU2-9P-201ENST00000410194 145 ntBASIC2.94□□□□□ -1.94
TO15178 RNU2-68P-201ENST00000410878 191 ntBASIC2.94□□□□□ -1.94
TO15178 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.94□□□□□ -1.94
TO15178 AC092809.3-201ENST00000415453 231 ntBASIC2.94□□□□□ -1.94
TO15178 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TO15178 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
TO15178 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.94□□□□□ -1.94
TO15178 CALM2P2-201ENST00000428512 440 ntBASIC2.94□□□□□ -1.94
TO15178 TIMM9P3-201ENST00000428659 274 ntBASIC2.94□□□□□ -1.94
TO15178 AL592045.1-201ENST00000429867 352 ntBASIC2.94□□□□□ -1.94
TO15178 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.94□□□□□ -1.94
TO15178 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.94□□□□□ -1.94
TO15178 RPL23AP20-201ENST00000447965 421 ntBASIC2.94□□□□□ -1.94
TO15178 DPPA3P1-201ENST00000448050 469 ntBASIC2.94□□□□□ -1.94
TO15178 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.94□□□□□ -1.94
TO15178 RPL21P39-201ENST00000463605 483 ntBASIC2.94□□□□□ -1.94
TO15178 RPL21P93-201ENST00000480465 489 ntBASIC2.94□□□□□ -1.94
TO15178 AC233702.1-201ENST00000482905 502 ntBASIC2.94□□□□□ -1.94
TO15178 AC087190.1-201ENST00000484462 480 ntBASIC2.94□□□□□ -1.94
TO15178 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.94□□□□□ -1.94
TO15178 AC093591.1-201ENST00000491435 481 ntBASIC2.94□□□□□ -1.94
TO15178 RPL21P16-201ENST00000495531 483 ntBASIC2.94□□□□□ -1.94
TO15178 RNU6-506P-201ENST00000516553 94 ntBASIC2.94□□□□□ -1.94
TO15178 SNORA64.4-201ENST00000516632 81 ntBASIC2.94□□□□□ -1.94
TO15178 RNU6-914P-201ENST00000516749 109 ntBASIC2.94□□□□□ -1.94
TO15178 RNA5SP165-201ENST00000517142 115 ntBASIC2.94□□□□□ -1.94
TO15178 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.94□□□□□ -1.94
TO15178 RANP3-201ENST00000530970 276 ntBASIC2.94□□□□□ -1.94
TO15178 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TO15178 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.94□□□□□ -1.94
TO15178 MIR5004-201ENST00000579078 107 ntBASIC2.94□□□□□ -1.94
TO15178 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.94□□□□□ -1.94
TO15178 AC068790.6-201ENST00000602558 258 ntBASIC2.94□□□□□ -1.94
TO15178 AC004852.3-201ENST00000614131 326 ntBASIC2.94□□□□□ -1.94
TO15178 AP001486.3-201ENST00000615334 372 ntBASIC2.94□□□□□ -1.94
TO15178 uc_338.11-201ENST00000619132 160 ntBASIC2.94□□□□□ -1.94
TO15178 AC091903.1-201ENST00000624322 454 ntBASIC2.94□□□□□ -1.94
TO15178 AL157786.1-207ENST00000627771 695 ntBASIC2.94□□□□□ -1.94
TO15178 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TO15178 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.94□□□□□ -1.94
TO15178 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.94□□□□□ -1.94
TO15178 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.94□□□□□ -1.94
TO15178 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.94□□□□□ -1.94
TO15178 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.94□□□□□ -1.94
TO15178 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TO15178 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.93□□□□□ -1.94
TO15178 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TO15178 ZNF680P1-201ENST00000436625 1469 ntBASIC2.93□□□□□ -1.94
TO15178 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TO15178 RNU1-105P-201ENST00000363470 161 ntBASIC2.93□□□□□ -1.94
TO15178 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TO15178 Y_RNA.534-201ENST00000384599 112 ntBASIC2.93□□□□□ -1.94
TO15178 RPS4XP8-201ENST00000402039 771 ntBASIC2.93□□□□□ -1.94
TO15178 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.93□□□□□ -1.94
TO15178 AC099548.1-201ENST00000421443 426 ntBASIC2.93□□□□□ -1.94
TO15178 AL591704.1-201ENST00000432574 275 ntBASIC2.93□□□□□ -1.94
TO15178 RPL36AP53-201ENST00000432891 316 ntBASIC2.93□□□□□ -1.94
TO15178 AC244505.4-201ENST00000434905 287 ntBASIC2.93□□□□□ -1.94
TO15178 RPS15AP9-201ENST00000439856 381 ntBASIC2.93□□□□□ -1.94
TO15178 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.93□□□□□ -1.94
TO15178 SSXP5-201ENST00000443473 287 ntBASIC2.93□□□□□ -1.94
TO15178 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.93□□□□□ -1.94
TO15178 RPL12P25-201ENST00000455592 494 ntBASIC2.93□□□□□ -1.94
TO15178 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
TO15178 RNU6-123P-201ENST00000516163 102 ntBASIC2.93□□□□□ -1.94
TO15178 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.93□□□□□ -1.94
TO15178 AP001893.2-201ENST00000526949 202 ntBASIC2.93□□□□□ -1.94
TO15178 OR5BN1P-201ENST00000532955 829 ntBASIC2.93□□□□□ -1.94
TO15178 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TO15178 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms