Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 AC016065.2-201ENST00000514530 444 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.3□□□□□ -1.72
RFXAPO00287 RNU6-307P-201ENST00000516743 106 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 RNA5SP179-201ENST00000517284 121 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 AC022868.1-201ENST00000517767 391 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.3□□□□□ -1.72
RFXAPO00287 DEFB108D-201ENST00000527787 222 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 CBX3P8-201ENST00000532412 525 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.3□□□□□ -1.72
RFXAPO00287 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.3□□□□□ -1.72
RFXAPO00287 MIR3124-201ENST00000582636 67 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 AC005899.2-201ENST00000584353 90 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 MIR5684-201ENST00000585074 65 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 AC091167.4-201ENST00000605079 184 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 AC064801.1-201ENST00000612025 407 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.3□□□□□ -1.72
RFXAPO00287 AC130454.1-201ENST00000622948 401 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFXAPO00287 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
RFXAPO00287 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RFXAPO00287 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
RFXAPO00287 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.3□□□□□ -1.72
RFXAPO00287 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RFXAPO00287 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFXAPO00287 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RFXAPO00287 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RFXAPO00287 DHX9P1-201ENST00000436565 3076 ntBASIC4.3□□□□□ -1.72
RFXAPO00287 GABPAP-201ENST00000419271 1356 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
RFXAPO00287 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFXAPO00287 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFXAPO00287 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.29□□□□□ -1.72
RFXAPO00287 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFXAPO00287 XIAPP3-201ENST00000312918 795 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 Y_RNA.270-201ENST00000364693 104 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 Y_RNA.416-201ENST00000384014 113 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 RNU6-701P-201ENST00000384059 107 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 RNU6-434P-201ENST00000384376 107 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 SNORA51.11-201ENST00000384442 131 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 Y_RNA.551-201ENST00000384661 102 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 SNORD73A-201ENST00000386062 65 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFXAPO00287 AL138885.1-201ENST00000405921 675 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.29□□□□□ -1.72
RFXAPO00287 RNU6-130P-201ENST00000411112 103 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 RNU6-516P-201ENST00000411381 104 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 MYL8P-204ENST00000431574 518 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 AL159987.2-201ENST00000432754 307 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.29□□□□□ -1.72
RFXAPO00287 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.29□□□□□ -1.72
RFXAPO00287 PTMAP3-201ENST00000447474 330 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 FCF1P4-201ENST00000448326 183 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 RNU6-27P-201ENST00000516146 107 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 RNU1-103P-201ENST00000516502 125 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 SNORA40.15-201ENST00000516884 107 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 AC092470.1-201ENST00000546187 132 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.29□□□□□ -1.72
RFXAPO00287 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.29□□□□□ -1.72
RFXAPO00287 RPL23AP97-201ENST00000568955 471 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.29□□□□□ -1.72
RFXAPO00287 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 AC244505.7-201ENST00000599675 272 ntBASIC4.29□□□□□ -1.72
RFXAPO00287 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.29□□□□□ -1.72
RFXAPO00287 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFXAPO00287 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RFXAPO00287 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFXAPO00287 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFXAPO00287 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFXAPO00287 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
RFXAPO00287 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 Y_RNA.29-201ENST00000362570 113 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 Y_RNA.297-201ENST00000364950 91 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 RNU6-708P-201ENST00000384217 107 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 Y_RNA.478-201ENST00000384358 107 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 RNU6-125P-201ENST00000384505 107 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 UBE2FP1-201ENST00000416536 447 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.28□□□□□ -1.72
RFXAPO00287 RPS3AP46-201ENST00000448352 682 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 PCMTD1P1-201ENST00000455560 355 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 RPL17P19-201ENST00000489069 552 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.28□□□□□ -1.72
RFXAPO00287 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.28□□□□□ -1.72
RFXAPO00287 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.28□□□□□ -1.72
RFXAPO00287 AC025627.2-201ENST00000576220 160 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 HMGN2P28-201ENST00000606102 262 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.28□□□□□ -1.72
RFXAPO00287 MIR1244-1-201ENST00000612829 85 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 AC005344.1-201ENST00000613391 459 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 MIR3651-201ENST00000630427 90 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 MIR1244-3-201ENST00000635744 85 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 MIR1244-2-201ENST00000636449 85 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 MIR1244-4-202ENST00000636813 85 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms