Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BNIP3P8-201ENST00000597863 560 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AL161798.1-201ENST00000604630 131 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.52□□□□□ -2.01
PDLIM1O00151 AC103710.2-201ENST00000609912 942 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM1O00151 AC008147.4-201ENST00000617570 1204 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AC092140.2-201ENST00000618027 521 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM1O00151 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM1O00151 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDLIM1O00151 RNU6-288P-201ENST00000363690 104 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 SNORA6-201ENST00000384033 151 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AL139397.2-201ENST00000404529 772 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 ZNF90P2-204ENST00000419323 1075 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 CYCSP46-201ENST00000423569 204 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.51□□□□□ -2.01
PDLIM1O00151 AL589872.1-201ENST00000426602 288 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC137499.1-201ENST00000427602 88 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.51□□□□□ -2.01
PDLIM1O00151 WARS2P1-201ENST00000429678 537 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 MTND1P28-201ENST00000435623 950 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 USP9YP15-201ENST00000442391 422 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 MTND1P12-201ENST00000455231 147 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 RPL26P9-201ENST00000457466 433 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 MRPS17P3-201ENST00000465453 385 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 MTND1P3-201ENST00000484956 952 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.51□□□□□ -2.01
PDLIM1O00151 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.51□□□□□ -2.01
PDLIM1O00151 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM1O00151 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM1O00151 AC118465.1-201ENST00000513820 1271 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 RNA5SP337-201ENST00000517007 109 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 RNA5SP165-201ENST00000517142 115 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AP003467.2-201ENST00000520175 319 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.51□□□□□ -2.01
PDLIM1O00151 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM1O00151 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM1O00151 LARP7P3-201ENST00000579888 337 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 HMGN2P15-201ENST00000585707 270 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC009977.1-201ENST00000586015 570 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC121247.2-201ENST00000604776 136 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.51□□□□□ -2.01
PDLIM1O00151 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM1O00151 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.51□□□□□ -2.01
PDLIM1O00151 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM1O00151 AL137790.1-201ENST00000634283 177 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
PDLIM1O00151 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM1O00151 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM1O00151 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
PDLIM1O00151 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
PDLIM1O00151 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PDLIM1O00151 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM1O00151 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PDLIM1O00151 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 RNU6-511P-201ENST00000363496 107 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 RNU5E-6P-201ENST00000365574 115 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 SNORA18.3-201ENST00000384122 132 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 RNY3P9-201ENST00000384727 106 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM1O00151 MIR888-201ENST00000401186 77 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AL021407.1-201ENST00000404531 386 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 RNU2-68P-201ENST00000410878 191 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 NPM1P11-201ENST00000417106 855 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM1O00151 AC093106.2-201ENST00000428212 385 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM1O00151 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM1O00151 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM1O00151 AC112220.1-201ENST00000434628 355 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 PGBD4P3-201ENST00000440731 581 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM1O00151 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM1O00151 SNRPFP4-201ENST00000456366 242 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 RPS29P20-201ENST00000489592 171 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 Y_RNA.672-201ENST00000516289 104 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 RNU6-143P-201ENST00000516942 93 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 RNU6-1092P-201ENST00000516955 87 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM1O00151 COX6CP5-201ENST00000527162 228 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.5□□□□□ -2.01
PDLIM1O00151 RPS3AP4-201ENST00000555161 764 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 CYCSP39-201ENST00000565821 309 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC010546.1-201ENST00000569391 485 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM1O00151 NRBF2P5-201ENST00000603087 788 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC104763.2-201ENST00000604179 382 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC007363.1-201ENST00000604736 620 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC007619.2-201ENST00000605743 379 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC068276.1-201ENST00000605793 379 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC107294.1-201ENST00000609524 467 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC008498.1-201ENST00000613012 531 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC008250.2-201ENST00000615261 205 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC108479.2-201ENST00000617314 601 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 AC007998.5-201ENST00000622938 237 ntBASIC2.5□□□□□ -2.01
PDLIM1O00151 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM1O00151 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM1O00151 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM1O00151 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM1O00151 CR848007.1-201ENST00000442354 1699 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms