Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC188H7C350 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC188H7C350 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC188H7C350 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC188H7C350 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC188H7C350 MIR4782-201ENST00000577987 79 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 MIR3167-201ENST00000579623 85 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 NRBF2P1-201ENST00000587407 859 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AC040904.1-201ENST00000590850 223 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AC073544.2-201ENST00000601155 540 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 MIR98-201ENST00000606724 119 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AL158063.1-201ENST00000615349 536 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC188H7C350 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC188H7C350 AL603839.4-201ENST00000624658 1005 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC188H7C350 FARSBP1-201ENST00000435808 1778 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 RNU6-778P-201ENST00000363269 103 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 U8.3-201ENST00000363321 132 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 SNORA38.1-201ENST00000364172 131 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCDC188H7C350 AC096664.2-201ENST00000411843 406 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC188H7C350 BPY2DP-201ENST00000422208 265 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC188H7C350 SKA2P1-201ENST00000425592 390 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC188H7C350 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC188H7C350 RPS20P5-201ENST00000434808 360 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AL022238.1-201ENST00000442557 355 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AC233279.1-201ENST00000455300 423 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 RN7SL504P-201ENST00000494496 287 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC188H7C350 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC188H7C350 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC188H7C350 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 RNU6-914P-201ENST00000516749 109 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 RN7SKP57-201ENST00000517248 293 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC188H7C350 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC188H7C350 AC022616.3-201ENST00000523940 148 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC188H7C350 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC188H7C350 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC188H7C350 ADI1P3-201ENST00000549509 470 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AC060766.3-201ENST00000591442 263 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AL356575.1-201ENST00000603008 283 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AC024153.1-201ENST00000603103 365 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AC091304.9-201ENST00000612091 226 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AL359547.2-201ENST00000615810 418 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 AC138915.1-201ENST00000565427 1685 ntBASIC2.84□□□□□ -1.95
CCDC188H7C350 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.84□□□□□ -1.96
CCDC188H7C350 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC188H7C350 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC188H7C350 CR848007.1-201ENST00000442354 1699 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 SNORA25.6-201ENST00000364121 118 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 RNU1-100P-201ENST00000365255 165 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC188H7C350 MED13P1-201ENST00000428342 171 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC188H7C350 RPL31P35-201ENST00000431058 377 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AC098826.1-201ENST00000433943 471 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 PGBD4P3-201ENST00000440731 581 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 RPS24P13-201ENST00000442520 397 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC188H7C350 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC022447.1-201ENST00000515358 464 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 RNU6-1315P-201ENST00000517187 99 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AC090136.1-201ENST00000520009 240 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AP002404.1-201ENST00000532005 451 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC087883.1-201ENST00000551882 391 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC012414.6-201ENST00000568241 401 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC188H7C350 MIR4513-201ENST00000581077 86 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC174048.1-201ENST00000603389 144 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AL451064.1-201ENST00000607718 471 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CCDC188H7C350 AC009487.2-201ENST00000420969 6821 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 AC026241.1-201ENST00000517873 2142 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC188H7C350 Z82195.2-201ENST00000612348 18351 ntBASIC2.83□□□□□ -1.96
CCDC188H7C350 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC188H7C350 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC188H7C350 NACAP2-201ENST00000318548 624 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC188H7C350 MIR558-201ENST00000384920 94 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 MIR1302-8-201ENST00000408342 128 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 RNU6-1025P-201ENST00000410629 104 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms