Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC007390.2-201ENST00000606229 3803 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 MAPK10-253ENST00000641010 4072 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC007785.2-201ENST00000598627 1916 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC139713.2-214ENST00000642059 1811 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC118273.1-201ENST00000525324 3006 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC016588.2-201ENST00000632484 3021 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RNU4-9P-201ENST00000364951 139 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RNU6-72P-201ENST00000384285 79 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.581-201ENST00000391017 97 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RNA5SP296-201ENST00000410523 111 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RN7SKP216-201ENST00000411050 312 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RNU2-14P-201ENST00000411053 191 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 PRELID3BP1-201ENST00000457142 540 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC006026.2-201ENST00000457376 180 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RPS26P28-201ENST00000470806 348 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 MED28P2-201ENST00000475771 317 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RPS18P6-201ENST00000476880 458 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC108022.1-201ENST00000493466 478 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC008897.1-201ENST00000494006 347 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RNU6-1338P-201ENST00000516328 91 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RNU6-406P-201ENST00000516470 107 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RNA5SP360-201ENST00000516555 118 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 DEFB108E-201ENST00000524692 240 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC090617.3-201ENST00000573670 475 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC053481.4-201ENST00000583164 216 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 MIR4443-201ENST00000585052 53 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC090617.7-201ENST00000623952 126 ntBASIC4.07□□□□□ -1.76
SHISA3A0PJX4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
SHISA3A0PJX4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 SNORD78.2-201ENST00000391076 69 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 U3.30-201ENST00000391308 210 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AL133270.1-201ENST00000402635 279 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AL603910.2-201ENST00000407268 136 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 RPL21P40-201ENST00000428586 483 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 SNRPEP9-201ENST00000436794 238 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AC009237.8-201ENST00000445492 379 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AC010469.1-201ENST00000463864 576 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 RN7SL244P-201ENST00000493405 297 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 PPBPP1-201ENST00000510807 373 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 RNU6-789P-201ENST00000517105 102 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AC069240.1-201ENST00000548774 375 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AL512605.2-201ENST00000592972 256 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AC136601.2-201ENST00000604356 474 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AC010900.2-201ENST00000604508 210 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AL450472.1-202ENST00000637286 180 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.06□□□□□ -1.76
SHISA3A0PJX4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHISA3A0PJX4 AL136964.1-201ENST00000622038 2990 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms