Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AC023043.2-201ENST00000589678 1026 ntBASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AL353770.2-201ENST00000620024 78 ntBASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AL118508.4-201ENST00000624142 1176 ntBASIC0.86□□□□□ -2.27
TRAV12-3A0A0B4J271 AP000776.1-201ENST00000530032 1663 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 MIR26B-201ENST00000362251 77 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 RNU6-252P-201ENST00000363232 107 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 Y_RNA.140-201ENST00000363474 103 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 RNA5SP99-201ENST00000364020 114 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 MIR525-201ENST00000384978 85 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 SNORA11.2-201ENST00000408318 127 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 MIR1283-2-201ENST00000408621 87 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 NDUFS5P4-201ENST00000412983 318 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 BTF3P8-201ENST00000414577 526 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 MTND5P25-201ENST00000430499 799 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 CYP2C59P-201ENST00000457790 269 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AC018868.1-201ENST00000491307 315 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AC093852.1-201ENST00000503587 266 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AC084364.2-201ENST00000546924 395 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AL356432.3-201ENST00000568952 465 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AC026271.5-201ENST00000577873 130 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 BPTFP1-201ENST00000579209 492 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 AC107905.1-201ENST00000616204 426 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 uc_338.12-201ENST00000616344 181 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 MIR3199-2-201ENST00000636243 86 ntBASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
TRAV12-3A0A0B4J271 OR6C66P-201ENST00000414917 930 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 OR51A5P-201ENST00000415429 942 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 CCDC58P2-201ENST00000417131 366 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AL591704.2-201ENST00000421658 181 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC244505.3-201ENST00000454598 187 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC117503.1-201ENST00000472241 394 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC084024.2-201ENST00000503480 791 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 SMURF2P1-201ENST00000514992 481 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 RPS3AP4-201ENST00000555161 764 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 MTCYBP22-201ENST00000603788 447 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 DUXAP11-201ENST00000603858 526 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AP001485.1-201ENST00000604799 199 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 AC097655.1-201ENST00000635075 318 ntBASIC0.84□□□□□ -2.27
TRAV12-3A0A0B4J271 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
TRAV12-3A0A0B4J271 MIR561-201ENST00000385216 97 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 USP9YP19-201ENST00000412165 485 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 USP9YP13-201ENST00000417797 480 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 USP9YP24-201ENST00000434374 697 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC241584.1-201ENST00000438469 1241 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL161788.1-201ENST00000441805 169 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL353691.1-201ENST00000451332 387 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 NDUFA5P7-201ENST00000452914 242 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC008379.1-201ENST00000463655 464 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC099513.1-201ENST00000490423 301 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 CKS1BP2-201ENST00000497342 240 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 NDUFA5P6-201ENST00000542110 379 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 NACAP3-201ENST00000552100 481 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC023825.1-201ENST00000566704 1030 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 VN1R80P-201ENST00000597126 338 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL670379.6-201ENST00000603753 252 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL670379.11-201ENST00000604059 253 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC091152.3-201ENST00000604227 325 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL670379.10-201ENST00000604330 253 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AC008162.1-201ENST00000604718 254 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL670379.1-201ENST00000604752 252 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL670379.2-201ENST00000604983 252 ntBASIC0.83□□□□□ -2.28
TRAV12-3A0A0B4J271 AL670379.5-201ENST00000605253 252 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms